Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0677 ATGGCTGAAATGATGAAGAATCCAAAAGTAATGAAGAAAGCAGAAGCTGAGGTGAGAGAGGTCTTCAATATGAAAGTCAGGGTTGATGAGAATTGCATCAATGAAATCAAATATTTGAAACTAGTTGTTAAAGAGACCCTGAGATTACTCCCTCCAATTCCTCTTTTGCTTCCAAGAGAATGTGGTCAAACATGTGAGATACATGGTTATCTCATACCAGCCAAAAGCAAGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGACTGAACCAGAGAGGATTTATCCGGAGAGATTCATTGATAGCACTATTGACTACAAACAGAGTAATTTTGAGTACATTCCTTTTGGTGTTGGAAGAAGGATATGCCCAGGAAGCACATTTGCTTCAAGAATTATTGAACTGGCCCTTGCAAAGTTGTTGTATCACTTTGATTGGAAGTTTCCAAATGGAATGATAAGTGAAGAATAG 483 0.383 MAEMMKNPKVMKKAEAEVREVFNMKVRVDENCINEIKYLKLVVKETLRLLPPIPLLLPRECGQTCEIHGYLIPAKSKVIVNAWAIGRDPNYWTEPERIYPERFIDSTIDYKQSNFEYIPFGVGRRICPGSTFASRIIELALAKLLYHFDWKFPNGMISEE* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0677 160 Gene3D Cytochrome P450 1 160 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 Pfam Cytochrome P450 2 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 160 - -
Gso18g0677 160 SUPERFAMILY Cytochrome P450 1 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Gso18g0677 160 PANTHER CYTOCHROME P450 71B11-RELATED 1 160 - -
Gso18g0677 160 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0677 160 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0677 Gso-Chr18 7626218 7626700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0677 1 160 Cytochrome P450 AT3G26330 51.250 1.10e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0677 - - gmx:113000140 324.709