Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0674 ATGTCTTCCATCATAAGAAATTTTGACATTGAAGCACCCCATGATGATAGAAGGAGAGTTGGTGTGATGAGAGAGAGAAATGAAGAAAACAAACATTGGGGTTACTCAACAAATTTGATGCTTTATGATGACCCATGGAAGATCAAGAAATTGCTCACAAAGAGTGACCTTGGCAACTTGAGTAGACTCTTGCTCCCCAAGAAATCGATAGAAGACTTGGTGCTGCCTGTGTTGAGTGTTGAATCCAAAAGAGAGGCTAAGACTGAAAAGGGAACCAAAATTACTATTTGGGATGTGGATACCCAATCCATGCACTATCTTGTCTTCAAGTTTTGGGTTTCATCAAGAAGTTATGTTTTCATTGACAACTGGACCAAAGAATTTGTGAATAGAAGGAGTTTGCAGATTAATGATGAAATTGGATTTCACTGGAATTCTTACAAAAATCAATTTGATTTTTCCGTTCTTGCTCGTGCATCATCAGCCAGGGATCAAACTCCTTAA 504 0.3829 MSSIIRNFDIEAPHDDRRRVGVMRERNEENKHWGYSTNLMLYDDPWKIKKLLTKSDLGNLSRLLLPKKSIEDLVLPVLSVESKREAKTEKGTKITIWDVDTQSMHYLVFKFWVSSRSYVFIDNWTKEFVNRRSLQINDEIGFHWNSYKNQFDFSVLARASSARDQTP* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0674 167 CDD B3_DNA 46 156 IPR003340 GO:0003677
Gso18g0674 167 Gene3D - 45 164 IPR015300 -
Gso18g0674 167 SUPERFAMILY DNA-binding pseudobarrel domain 44 153 IPR015300 -
Gso18g0674 167 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 17 159 - -
Gso18g0674 167 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 17 159 - -
Gso18g0674 167 Pfam B3 DNA binding domain 50 155 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0674 Gso-Chr18 7603637 7604140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0674 44 165 B3 DNA Binding Superfamily AT3G26790 28.571 1.79e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gso18g0674 B3 8.3e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0674 - - gsj:114396848 343.969