Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0671 ATGCACAATTCCTCAGCTCTGCAACTCTCTTTCTCTCTCTTTCCATTTCCATGTTCATGGCAATTTCAAGTTCTTCCTCCTCAGTGTTCCCACCGCCCCAGCCTTTGCTCCAGCCCCTCTTTTTTGAGTCATCCAGAATCAACACCAGCGTTTTTACTCAGAATGGCTGTGAACAATCGCTGTTTCGTGGAATGGAAAGAGCAGTTTGTTTCTCAGGAGCGCGGTAATCGCGTGGTTCACTATTACCTGAAGGATTCTGCAGGGGAACCCGTCCTTGCAGTTGTGGGCACTGAGAGGAGTGTTAGGCACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAATTTGTGGGAAGGAGGGTTCCATTCCAACTGGTTTCAAATGGAGATCTAGAAGGGAGGTGGTAGATTGGCTGACATCAACACTATCGAAGCAAAATCTGCAGGGAGATAGAAGTGTATCATCTGGTCATAACTTGGTACCAGCTCATGAGACCACAAATGACACTGTCAACGAAATTACTGGTCTGTCTGTTCAAATAACAGATGACAAGGACTTTCCTATGAGTAACTCCAAACTATCCAATTCAGACATTGTTTGGTCAGGAGTTGCATGGAGATGTGGCAAACAACTTAAGCATTATCCAGCTTTTTTCAGGAATGGCATCAAAATAGCGATTCAATCCTTTGTTTTTGTTATGGGCAAGGGAGAGAACCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGGGGACAGAAAAAGGTCAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTAAGAAATCTTCACCCTCGGGAAGTTTTTATCACACCTTATTCTCAAGTCATTAGTGCAGAGTGCGTAGATGGTTCTGCCACAGTCTTAACTCGTGAACACTATGAAAAATGCATGCCTTTTTTTTCCCCCACTTCAAGGGACAGAATACATTTGTGCTTTAGGCAGTTTAGAAGCAACAAAGTCAAGCCCTTTGACTTCAGTAAACTGCGTGGTTACTATACTCAACCAATTCTTTCTTGCTTGCACCATGATTCAATCCAGAACCCTGAGAGCCTTGTGGGAGAAGATGAAGAGTTGAGTGCAGGTGAGGATGTGAAGGTAGGAGCCAAGAGGAGGAGAGGTGATAAGGGGTCTCCTCAGTCTTGGATAAGTCGCCAGGGAGTTAGGAAGTTAATTAAGAGTAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTATGCAAGATCAGAAAGGAGATTGCTTTCTCGGAAGCAGGTTGAGTGTCAACCTTGGTCTAACCACACATACAAGGTTGATGACAAGATAGAGTTACTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCCCGGAAGCAGTTGAAAGTCCAATATGATGATGTCCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATCCCTGCTTTCAAGTTAGCCAGGCCTGATAAACTTGGGATGAGGCATTCTGGCCGCCCCACCATCAGGCCAGCTCCAACTTATGAGGAACAGGAACTAGCTGTTGAGGTTGGAAATGCAGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGGGTTGTAACTAGAAATGACAACTGTGGTGATGATAGTGCTCAAGTCTACTTTCCCGGTGAATGCTTGCTGATGAAAGTGTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAATTGGATTAACATTATGGCAAAACCTGAAATAACTAAAACTATTATATTCACAGCTAATAATAGTTTTAACACAGAGCTTTATGTGTCCCCATCTATCGCTAAAGATGTGGACTCTGTTGGTTTTGCTAATTCATGTCATGGTGATCCTGTTAGTAAGAAGTCAAATGAACCGGTTATCAAAGAAGTGAATCTTGTGTCTTGTGATGGCTCTACTAAAGAAGAGAATTTTGTGTCTTGTGATGACTCTGCTGAAGATAGGGACTGTGTTCAGGATAATAAACCCTCTTCAGAAAAATGTACTCAAGCTGAAAATATTGATTCAGATGTCAATTGTGATCATGAAGACAATTGTGTTGATAATGATAATGATAAGAATAGCGATGATGGTGGTAACAAGAATGATGATGATAATGGAAATAAAGATATGGAGGTATTTGAAACTTCTGTACTGGATGGAGAAACTGTAGAGCTCATGGAAGTGGCTGTATAA 2256 0.4251 MHNSSALQLSFSLFPFPCSWQFQVLPPQCSHRPSLCSSPSFLSHPESTPAFLLRMAVNNRCFVEWKEQFVSQERGNRVVHYYLKDSAGEPVLAVVGTERSVRHMCYVVAEEFLEICGKEGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSVSSGHNLVPAHETTNDTVNEITGLSVQITDDKDFPMSNSKLSNSDIVWSGVAWRCGKQLKHYPAFFRNGIKIAIQSFVFVMGKGENHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNLHPREVFITPYSQVISAECVDGSATVLTREHYEKCMPFFSPTSRDRIHLCFRQFRSNKVKPFDFSKLRGYYTQPILSCLHHDSIQNPESLVGEDEELSAGEDVKVGAKRRRGDKGSPQSWISRQGVRKLIKSKQMMVYKTFQVANYARSERRLLSRKQVECQPWSNHTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSGNLEEWIPAFKLARPDKLGMRHSGRPTIRPAPTYEEQELAVEVGNAVDAWWSDGWWEGVVTRNDNCGDDSAQVYFPGECLLMKVCKKDLRISRDWLGDNWINIMAKPEITKTIIFTANNSFNTELYVSPSIAKDVDSVGFANSCHGDPVSKKSNEPVIKEVNLVSCDGSTKEENFVSCDDSAEDRDCVQDNKPSSEKCTQAENIDSDVNCDHEDNCVDNDNDKNSDDGGNKNDDDNGNKDMEVFETSVLDGETVELMEVAV* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0671 751 ProSiteProfiles BAH domain profile. 222 341 IPR001025 GO:0003682
Gso18g0671 751 SMART agenet_At_2 529 587 IPR014002 -
Gso18g0671 751 SMART agenet_At_2 443 508 IPR014002 -
Gso18g0671 751 Gene3D - 190 340 IPR043151 -
Gso18g0671 751 Pfam Agenet domain 448 522 IPR008395 -
Gso18g0671 751 SMART BAH_4 222 341 IPR001025 GO:0003682
Gso18g0671 751 MobiDBLite consensus disorder prediction 707 731 - -
Gso18g0671 751 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 58 715 - -
Gso18g0671 751 Pfam BAH domain 225 330 IPR001025 GO:0003682
Gso18g0671 751 PANTHER OS07G0607300 PROTEIN 58 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0671 Gso-Chr18 7579557 7586503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0671 457 585 PHD Transcription Factor Family AT5G58610 30.075 1.58e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0671 - - gsj:114395106 1517.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0671 18 7579557 7586503 Gso8g2715 8 44794117 44802749 GST