Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0649 ATGTACTTACCATCTACTATCATCTTCATCCTCTTCCTCCTCCTCCTCCTCCTCCTCCCCCCAACATCTTCAACAACAATAACAAACTTCTCCCACAATCAGAACACAACCACCTTGTTGTTCACCTTCCCCTCCTTCACTCTCCGCAACATCACCCTCCTCGGCGACTCCTTCCTCCGTGACGGTGTCGTCGGCCTCACCCTCTCCACCCCCGTCCCCGCCTCCTCCTCCGGCACCCTCCTCTACAACAACCCCATCACCACCACCACCCCTTCCTTATTCTCTCTCTCCACCTCCTTCACTTTCTCCATCACCAACACCACCCCCACCACCTCCTCCTCCACCTTCACCTTCTTCCTCTACTCCTCCCACAACCTCTCCCTCATCTTCCACCCCAATGATGATAACCACCTCACCCTAGACTTAACCACTCCAAACTCCACCCTAACCAACATTCCAACAACATTCACTGATCTCAACACTCAGAATAATAATATTCCAATCACTTCTTGGCTTGACTACCATGCTCACACCAAAAAACTCAACGTTTTCTTAAACTACTCTTCAGTACCTTCTTCCAAGCCTCAAAATCCAATCTTGAGCGTTGACCTTGACCTTTCTCACTACTTCAAGGACAATCTCTATGTGGGGTTTTCGGGTTCAACGCTAGGAAGCACCGAGCTTGTCCAAGTCATGAGTTGGAGCTTCGAGTTTGAGTCTTTTCAGAAACCGGGTTCAAACTTGCACCCCGACAACGGTTCTAGAACCCCCGCGAGTGTTGCGGTTTCGGACATTCCTTCTCCTTCAAACTCAACCGAGGGTAATAGTTATAACCGTGGCAAGAGATTTTTCTTTGGTGTTGCTGTTGCCATTGCTGGCCCTGCTTTCTTCTGCGTGGTGCTTGTGGTGTTGGGGTATGTTTCTTTCCTCAAGTGGCGTGGCGTGAGGAAATTACAGAAGAGTTTTGGAACAGTGGGGTGTTGTCCTAAGGAGTTTGGTTACAAGGAGGTTAAGTTAGCCACCAAGGGGTTTCACCCTTCGAGGGTAATTGGGAAAGGATCGTTTGGGACAGTGTACAAGGCCTTGTTTGAGTCTTCAGGAACCATTGCCGCGGTTAAAAGATCAAGACAATATTCTCATGAAGGAAGAACCGAGTTTCTGGCTGAGCTTTCTGTTATAGCAGGTTTGAGGCACAAGAATTTGGTCCAACTCCTAGGTTGGTGTGTTGAGAAAGGTGAATTGTTGCTTGTGTATGAGTTTATGCCAAATGGAAGCTTGGACAAGGTACTTTACCAAGAATGTGAAAGTGGGAATAATAGCAACAATGTGTTGAGTTGGAATCATAGGGTAAACATTGCTGTTGGTTTGGCTTCTGTGTTGAGTTATTTGCACCAAGAGTGTGAGCAAAGGGTGATTCACAGGGACATTAAGACTGGTAACATATTGCTAGATGGGAGCATGAACCCAAGGTTGGGTGATTTTGGTTTGGCAAAGCTTATGGATCATGACAAGAGTCCTGTTTCAACACTAACTGCAGGGACAATGGGGTACTTAGCTCCTGAGTATCTTCAGTGTGGAATGGCAAATGAGAAGACTGATGTGTTCAGCTATGGTGTGGTGGTTCTTGAGGTGGCTTGTGGAAGGAGGCCAATTGAAAGAGAGGGGCAGAAGATGGTAAATTTGGTGGATTGGGTTTGGGGGTTGCACTCTCAAGGGACGATCATTGAGGCTGCTGATAAGAGATTGAATGGGGATTTTAGAGAAGGGGAAATGAAGAGGCTTTTGCTTTTGGGGTTGAGTTGTGCTAACCCTGATAGTGCTCAAAGGCCTTCCATGAGAAGAGTGTTGCAGATACTTAATAATAACCAAGGAGTGGCTCTTGTTGTGCCTAAGGAGAAACCTACACTTACTTTCTCCTCTGGCTTGCCTTTGAGTCTTGATGAGATTGTTTCTGATGCAGAGGAAGAGTTGGATTCTGGCCAGGTTGTGTGTGAGATCAAAATTGATTGA 2010 0.4697 MYLPSTIIFILFLLLLLLLPPTSSTTITNFSHNQNTTTLLFTFPSFTLRNITLLGDSFLRDGVVGLTLSTPVPASSSGTLLYNNPITTTTPSLFSLSTSFTFSITNTTPTTSSSTFTFFLYSSHNLSLIFHPNDDNHLTLDLTTPNSTLTNIPTTFTDLNTQNNNIPITSWLDYHAHTKKLNVFLNYSSVPSSKPQNPILSVDLDLSHYFKDNLYVGFSGSTLGSTELVQVMSWSFEFESFQKPGSNLHPDNGSRTPASVAVSDIPSPSNSTEGNSYNRGKRFFFGVAVAIAGPAFFCVVLVVLGYVSFLKWRGVRKLQKSFGTVGCCPKEFGYKEVKLATKGFHPSRVIGKGSFGTVYKALFESSGTIAAVKRSRQYSHEGRTEFLAELSVIAGLRHKNLVQLLGWCVEKGELLLVYEFMPNGSLDKVLYQECESGNNSNNVLSWNHRVNIAVGLASVLSYLHQECEQRVIHRDIKTGNILLDGSMNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQCGMANEKTDVFSYGVVVLEVACGRRPIEREGQKMVNLVDWVWGLHSQGTIIEAADKRLNGDFREGEMKRLLLLGLSCANPDSAQRPSMRRVLQILNNNQGVALVVPKEKPTLTFSSGLPLSLDEIVSDAEEELDSGQVVCEIKID* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0649 669 PANTHER - 32 652 - -
Gso18g0649 669 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.7-RELATED 32 652 - -
Gso18g0649 669 Gene3D - 129 238 - -
Gso18g0649 669 CDD STKc_IRAK 350 621 - -
Gso18g0649 669 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Gso18g0649 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 238 IPR013320 -
Gso18g0649 669 Gene3D Transferase(Phosphotransferase) domain 1 421 629 - -
Gso18g0649 669 Pfam Legume lectin domain 134 241 IPR001220 GO:0030246
Gso18g0649 669 Pfam Legume lectin domain 40 125 IPR001220 GO:0030246
Gso18g0649 669 SMART serkin_6 344 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0649 669 MobiDBLite consensus disorder prediction 245 274 - -
Gso18g0649 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Gso18g0649 669 ProSiteProfiles Protein kinase domain profile. 344 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0649 669 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Gso18g0649 669 Gene3D - 37 128 - -
Gso18g0649 669 SUPERFAMILY Protein kinase-like (PK-like) 329 631 IPR011009 -
Gso18g0649 669 Pfam Protein kinase domain 345 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0649 Gso-Chr18 7153455 7155783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0649 41 655 Receptor kinase-like Gene Family AT5G55830 52.816 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso18g0649 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0649 - - gmx:100808744 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0649 18 7153455 7155783 Gso14g0116 14 1050966 1052955 PCT
Gso14g0116 14 1050966 1052955 Gso18g0649 18 7153455 7155783 PCT