Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0635 ATGGAAATTGGGAAAGAGGATGAGATTGTGGACATGTCAATGTCACCCCCATTAGTTGGTTCCACTAACAATGACACTTGTCACAACAAAGACATCATGTCTCAGGCATATCTTCAAAATAAGTACTCAGAGATTGACATAAAAATTGAAGGTTCCAATATGGAACAAAATCGCCCCCTCCCCATATTTCTCAAGTTTGAAAATGTGGAGTATAAGGTGAGAAATAGAAAAGCAGGCTCTAGTAACCTTGTGAAAACAATGGTGTCAAAGGTATCCACACAACTCACTGTGGAAGAAGATAGATATAAGAAAATTTTGAAGGGCATCACAGGAAGCATAGGCCCCGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGCAGTGGGAAGACAACCTTGTTGAGAGTCATAGGAGGAAGAATAGTTGACAATGTAAAGGGAAAAGTAACATACAATGATGTTCGTTTTACTCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTACCCACAATTAACTGTTGAAGAAACTTTAGTCTTCTCTGCACTCTTGAGGCTGCCAACCAATATGAGCAAGCAGCAAAAATATGCAAAAGTGAATACAACTATCAAGGAGCTAGGCCTTGAAAGATGCCGCCACACAAAAATAGTTGGAGGATATCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCTGCATAGGCTATGAAATTCTTGTTGATCCTTCACTGTTGCTACTTGATGAACCAACTTCTGGCCTTGATTCCACCGCAGCAAACAAACTCCTTCTCACACTTCAAGGACTTGCTAAGGCTGGAAGGACTATAATTACAACAATACATCAGCCATCCAGCAGAATCTTTCATATGTTCGACAAACTTCTTCTAATATCAGAAGGCTATCCTGTTTACTATGGAAAGGCTAAGGACACAATGGAGTACTTTTCATCCTTGAGATTCACCCCACAAATTCCAATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGACAAGTGAATGACATAAGTGTTCCAACTGATATCTTGCAAGATCAAGAATCTTCTGACCCTTCAAAAGTTGTTATTGAATATCTACAACTCAAATACAAAACTCTACTGGAACCAAAAGAAAAAGAAGAGAACCATAGAGGAGCAAACACACCAAAACATCTTCAACAAGCCATTCAGGTTAAGAAGGAGTGGACATTGAGTTGGTTGGACCAATTTGATATTCTTTCCAGGAGAACATTCAAAATACGATGCAAGGACTATTTTGATAAGCTAAGACTAGTTCAAGCACTTGGTATTGCACTTTTGTTAGGGCTCCTTTGGTGGAAATCTTCAACCAACACTGAAGCTCAACTCAGAGATCAGGTTGGTTTGGCTTTCTACATCTGTATATTCTGGACATCTTCAAGTATTTTTGGAGCAGTCTATGTCTTTCCATTTGAGAAGTACTACTTGATAAAAGAAAGGAAAGCTGACATGTATAGACTAAGTGTATACTATGCATGTAGCACTATATGTGACATGGTGGCACATGTTTTGTATCCTACATTTTTCATGGTCATCTTGTACTTCATGGCTGGCTTTAAGAGGACTGTTGCTTGCTTCTTCCTGACACTATTCAGTATTCTGTTAATTGCCATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAATTATGAGTGTTCAAAGAGCAGGGACAGCTGCTTCTTTAATACTAATGTTATTCCTTCTCACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGAAGTGGTTGAAGTATTTGTCCTTCATGTACTATGGCTTCAGGCTTCTTCTAAAAGTGCAGTATTCAGGTGACCAATTATATGATTGTGAAAGCAAGGGAGGGTGCAGGACCCTGCAGAGTTCACCTACATTTGGCATTGTAAACTTGAAAGGTGGATTAAAAGAAGTGTGGATTCTGCTAGCTATGGCCTTAGTCTTTCGATTGTTAGCTTACTTGTGCCTTCGTAGAAGAATTGATCATTCCAACTAA 2049 0.3997 MEIGKEDEIVDMSMSPPLVGSTNNDTCHNKDIMSQAYLQNKYSEIDIKIEGSNMEQNRPLPIFLKFENVEYKVRNRKAGSSNLVKTMVSKVSTQLTVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRIVDNVKGKVTYNDVRFTPAVKRRIGFVTQEDVLYPQLTVEETLVFSALLRLPTNMSKQQKYAKVNTTIKELGLERCRHTKIVGGYLKGISGGERKRTCIGYEILVDPSLLLLDEPTSGLDSTAANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKAKDTMEYFSSLRFTPQIPMNPAEFLLDLATGQVNDISVPTDILQDQESSDPSKVVIEYLQLKYKTLLEPKEKEENHRGANTPKHLQQAIQVKKEWTLSWLDQFDILSRRTFKIRCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLAFYICIFWTSSSIFGAVYVFPFEKYYLIKERKADMYRLSVYYACSTICDMVAHVLYPTFFMVILYFMAGFKRTVACFFLTLFSILLIAITSQGAGELFGAAIMSVQRAGTAASLILMLFLLTGGYYVQHIPKFMKWLKYLSFMYYGFRLLLKVQYSGDQLYDCESKGGCRTLQSSPTFGIVNLKGGLKEVWILLAMALVFRLLAYLCLRRRIDHSN* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0635 682 Pfam ABC-2 type transporter 413 621 IPR013525 GO:0016020|GO:0140359
Gso18g0635 682 CDD ABCG_EPDR 81 310 - -
Gso18g0635 682 Gene3D - 88 323 IPR027417 -
Gso18g0635 682 Pfam ABC transporter 106 256 IPR003439 GO:0005524
Gso18g0635 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 678 - -
Gso18g0635 682 SMART AAA_5 115 306 IPR003593 -
Gso18g0635 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 321 IPR027417 -
Gso18g0635 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 91 328 IPR003439 GO:0005524
Gso18g0635 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 3 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0635 Gso-Chr18 7020357 7024673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0635 104 289 Calmodulin-binding Proteins AT2G36910 28.230 5.92e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0635 K05681 - gmx:100806094 1329.69