Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0625 ATGCCACAAGAGAGCTCCCAAAACTCATTTTTCACATCTCCTTCAAAGAGAGGATTGAAGGGTTTGGTCTCCATCAACAAGGAGCCTTCATGCACTGCTGCCACAGATGAGAGTTTCAATGATAATGAATTGGCTCAGAGGAAGGCAGAGGAAACAGCTTCGAGAAGATACAAAGCAACTGAATGGCTACGCCAAATGGACCACTTTGCATCTTCATCACTCTCTCCAACTCCCTCCGAAGAAGAGTTTTGCCTTTCACTCCGCAATGGCCTCATTCTATGCAATGTCCTCAACAAAGTCAACCCCGGTGCTGTCCTTAAGGTGGTGGACAATCCTGGGCTTGCTGTCCAGTCTGCAGAGGGGGCGGCCCATTCTGCAATTCAGTATTTTGAGAACATGAGGAACTTTTTGGAGGCTGTTAAGGATATGCAGCTTCTCACATTTGAAGCATCTGATTTGGAGAAGGGAGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAAGGATTTTATGAATGGAAGTTATCTGGTGGGGTTGGTGTGTGGAGATATGGTGGAACTGTGAGGATCACTTCCTTTCCAAAGAAGTCTCCTTCCTCCACAGTTGGCAGTGAAAGTGCTGATGAATCACTGGATGAGTCAGAATCATCACAGTATGAACAATTGCTTGAATTTCTTCAACTATCTGAAGACTTCTTGATTGAAGAAACCAGAACTGCCAATGCTCTTGCTTTCCTTTATGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGGCCAATAATGGGATTGAAGATCTGCCTCTGAATGCAATGGTAATTGATACCTTACTCAGCAAGGTAGTCAAGGATTTCTCATCTTTGCTTGTTTCTCAAGGCAATCAGCTTGGACTTTTCCTTAAGAAAATACTTAAAGGTGATATTGGTTGTCTCTCAAAGAGAGAGTTCATAGAAGCCATCTCACTATATCTTAACCAAAGAAGTAGTTTGGCATCAAATGATTTCTCCAAATTCTGCAATTGTGGCGGAAAGCGTGATAGTATTCGACAGAATGCCAATTATTCTGAAAAATATGTTGAAGTAATCAATACTCAACAGAAACAACTTGAGGGTATGAAGTACTTTTTTGAAGAGACAAAATTGGAGGTCAGACAAATTCAATCAGAATGGGAAGAAGAATTGAGTAGGCTAGAGCATCATATCAAAAGCCTTGAAGTGGCCTCCTCTTCCTACCACAAAGTTTTGGAGGAGAACCGCCTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTGAGGCCATTCTTACCAGGACAATCAAATGGACCGTCAACGGTAGACTACATTGGAGAAAATGGAGATATGATGATAGTAAATCCCCTTAAACATGGAAAAGATGCTAGAAGGGTTTTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGACACTCAATCGTTGATTAGATCTGTTTTAGATGGTTACAATGTATGCATCTTTGCATACGGACAAACTGGCTCAGGGAAAACATACACAATGAGTGGCCCTGATCTGACAACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTCATATATCAAAGGAAAGGGCTGGTTCCATAAAATATGAAGTTTTTGTTCAGATGATTGAAATCTACAATGAACAAGTGAGAGATTTACTAGTCAGTGATGGCTCTAACAGAAGATTAGACATACGAAACACTTCTCAATTGAATGGCATCAATGTGCCTGATGCATTTTTAGTTCCGGTTACTTGTACTCAAGATGTTCTAGACTTGATGAGAATTGGTCAGAAGAACCGTGCTGTAGGTGCTACAGCTCTAAATGAGAGAAGCAGTCGTTCTCATAGTGTTTTGACTGTTCATGTTAGAGGAAGGGAGTTAGTTTCCAACTCCATTCTTAGAGGTTGTCTTCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTTGAAAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCTCAACATATAAACAGATCACTTTCTGCACTTGGGGATGTTATCTCAGCCTTGGCACAGAAGAGTCCACATATCCCTTATAGGAATAGCAAGCTCACACAAGTGTTACAAGATTCTTTAGGAGGGCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTGAATGCTATTGGGGAGACAATTAGCACACTCAAGTTTGCTGAGAGGGTTTCGTCCATTGAACTTGGAGCTGCTCAATCTAACAAAGAAACTGGTGAAATCCGAGATTTAAAGGAAGAGATATCAAGTCTCAGATTAGCATTGGAGAAGAAGGAAGCTGAATTGGAGCAATGTAAGGCTGGGAATGCTCGAAACACCATTGATTCTCAAAAACCAAGAGCTGTTTCACCTTTTCAATTACCAAAATATGGTACCAGTGGCAACATGAAGCATGAAAGTGGTCAAAGACTCATGGATGATAGAAACTTTGAGTCTAGAAGTTGCTCTTCTGGTAAGCAAAGAAGGTCAAGGTTTCCCTCAGCATTTATAGACAAGGACTCCATGCCAAAAATGTCTCTACTAACGGAAGAAAAGTTAGTGAGCTCAGGGAAAGGAAGATCACAATCCCCTCCAGTAAGAAGATCACTATCCAATGATAGAGGGACAACCATTAAAAGCAAGGTCAAAACTGAAACAGTAGACAACCAACCAATATTAAAGCATCCATTTCCAGCTAGAGTACCAGCTAACAAATCCCTTGCCACAATGCCAGTGGCTGCATCCACTGACAATAACACAAGAATGTATGTGAATTCACAAGAGCCAGTAAAGCAGGAAAACATTTCTGAAACACTCTTCAACCTCCAGAAGGTCAACTATAAGAAAGTACATCAAGAACATGAAGAGGAACAATTCAAGCAAGCACTCAGTGCAGTAAGACAAGGTGGTATTAGAAAAAGCAAGGTTGAGAGTATGGCTAAAGCCAAGCATCCTCAACTATCACCCTTTAAGATTCAAAAGCCTGATCTGATCCCAACATTTATTCCTGACATGGATTTTGCTGGTGAAATCACTTTAGAGCAACCTCCAAAGAATGATTACTCTGAGGCTGAAAATGATCTTAGATTTATGGAGACTGCTGTCCATGGTGCTTTAAGTCTCAAAAAAATACGTCAGAACTTTGCTAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTGCAAACAGGAGAGCCTTTATTGGTTAGCAAAGTTGAAAACAAAGTTGTGAATGGTTCGGGTAGCAATATTAAAGAAGGAAGCAATGCATCCACGCCTGAATTTAGAAGGAGCCGATCTACCCCACGTGGAAAGTTTTTTGGTTTATCATGA 3420 0.4073 MPQESSQNSFFTSPSKRGLKGLVSINKEPSCTAATDESFNDNELAQRKAEETASRRYKATEWLRQMDHFASSSLSPTPSEEEFCLSLRNGLILCNVLNKVNPGAVLKVVDNPGLAVQSAEGAAHSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGFYEWKLSGGVGVWRYGGTVRITSFPKKSPSSTVGSESADESLDESESSQYEQLLEFLQLSEDFLIEETRTANALAFLYDHFGLRLLQAYLREANNGIEDLPLNAMVIDTLLSKVVKDFSSLLVSQGNQLGLFLKKILKGDIGCLSKREFIEAISLYLNQRSSLASNDFSKFCNCGGKRDSIRQNANYSEKYVEVINTQQKQLEGMKYFFEETKLEVRQIQSEWEEELSRLEHHIKSLEVASSSYHKVLEENRLLYNQVQDLKGAIRVYCRVRPFLPGQSNGPSTVDYIGENGDMMIVNPLKHGKDARRVFSFNKVFGTSVTQEQIYADTQSLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALRDLFHISKERAGSIKYEVFVQMIEIYNEQVRDLLVSDGSNRRLDIRNTSQLNGINVPDAFLVPVTCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVEKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVSSIELGAAQSNKETGEIRDLKEEISSLRLALEKKEAELEQCKAGNARNTIDSQKPRAVSPFQLPKYGTSGNMKHESGQRLMDDRNFESRSCSSGKQRRSRFPSAFIDKDSMPKMSLLTEEKLVSSGKGRSQSPPVRRSLSNDRGTTIKSKVKTETVDNQPILKHPFPARVPANKSLATMPVAASTDNNTRMYVNSQEPVKQENISETLFNLQKVNYKKVHQEHEEEQFKQALSAVRQGGIRKSKVESMAKAKHPQLSPFKIQKPDLIPTFIPDMDFAGEITLEQPPKNDYSEAENDLRFMETAVHGALSLKKIRQNFARNFQNLESRGIVQTGEPLLVSKVENKVVNGSGSNIKEGSNASTPEFRRSRSTPRGKFFGLS* 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0625 1139 Coils Coil 391 411 - -
Gso18g0625 1139 SMART ch_5 55 172 IPR001715 GO:0005515
Gso18g0625 1139 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 1134 - -
Gso18g0625 1139 SUPERFAMILY Calponin-homology domain, CH-domain 47 201 IPR036872 -
Gso18g0625 1139 MobiDBLite consensus disorder prediction 845 867 - -
Gso18g0625 1139 MobiDBLite consensus disorder prediction 1108 1126 - -
Gso18g0625 1139 Pfam Calponin homology (CH) domain 55 174 IPR001715 GO:0005515
Gso18g0625 1139 Gene3D Kinesin motor domain 378 765 IPR036961 -
Gso18g0625 1139 ProSiteProfiles Kinesin motor domain profile. 435 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0625 1139 MobiDBLite consensus disorder prediction 880 909 - -
Gso18g0625 1139 ProSiteProfiles Calponin homology (CH) domain profile. 53 174 IPR001715 GO:0005515
Gso18g0625 1139 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 28 1134 - -
Gso18g0625 1139 MobiDBLite consensus disorder prediction 1108 1139 - -
Gso18g0625 1139 Gene3D - 45 173 IPR036872 -
Gso18g0625 1139 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0625 1139 PRINTS Kinesin heavy chain signature 633 650 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0625 1139 PRINTS Kinesin heavy chain signature 664 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0625 1139 PRINTS Kinesin heavy chain signature 713 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0625 1139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 799 IPR027417 -
Gso18g0625 1139 MobiDBLite consensus disorder prediction 884 909 - -
Gso18g0625 1139 Pfam Kinesin motor domain 441 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0625 1139 SMART kinesin_4 433 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g0625 1139 Coils Coil 777 804 - -
Gso18g0625 1139 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0625 Gso-Chr18 6902366 6913207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0625 426 763 Calmodulin-binding Proteins AT5G65930 42.442 1.43e-74 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0625 K10406 - gmx:100786466 2174.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0625 18 6902366 6913207 Gso8g2755 8 45252627 45262957 GST
Gso18g0625 18 6902366 6913207 Gso14g0100 14 880917 889830 PCT
Gso18g0625 18 6902366 6913207 Gso2g2572 2 49973732 49982813 PCT
Gso14g0100 14 880917 889830 Gso18g0625 18 6902366 6913207 PCT
Gso2g2572 2 49973732 49982813 Gso18g0625 18 6902366 6913207 PCT