Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0621 ATGAGCGATTCTGCATACAGAGTCGAAACCACGCCGCGCCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTACCGAAAATCCGATCCTTTCAAGATCGGAAACTGGAATTGGCATTTGTCGGTGGAGAAAAACAGGGTTTTGTTTGTTAAATTGTTCCCAGAAATATCCAATCTTACGAGAGACAACCCCCCAATTGCATCTTTCATCGTTCGGGTGGTTAGTTCTGTTGGAGATCGCAAGGCCATCACACATCCAGAAATAAAGGACAAAGTGTTAAAGAACAACGAGGATTTTGTTTGGGCAATTGAAGTTCCACTAACTGGAAAATTCATTATTGACGTAGAGTTTCTTGATTTGAAGACTGCATCCCCAAACGGAGGAGAACCTTGTTCCATTTGGGCAGAAGGATTTACTCAGCAAAGATCAAATGCAAAAGCCATAGAGTCTCTTGGAAGAATGCTAACAGAAGGCATCCACACGGACATCACCATCAATGCTTCTGATGGAAGTATTGGAGCTCATAGAGCTGTTCTTGCTGCCAGATCACCCGTCTTCCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAATTGTCAACCATAAACATCTCAGACATGTCACTTGAATCATGCCAGGCTTTTCTCAATTATCTTTATGGGATCATCAAACATGAAGAGTTTCTGACTCATAGGCTGGCCCTTCTGCACGCGGCCGACAAGTATGACATATCTGATTTGAGAGATGTATGCCATGAGAGTCTTCTAGAAGATATTGACACAAAGAATGTACTTGATAGGCTCCAAAATGCATCTCTATATCAGTTGATGAAACTGAAGATGAGTTGCATCCGATATCTTGTGAAGTTTGGTAAAATATATGAAATTCGTGAAGATTTCAATACCTTCCTGCAAAATGCAGATAGGGATCTGATTGCTGAGGTCTTCCATGAAGTTCTTGATGCTTGGAAAGGATTCTGA 987 0.4174 MSDSAYRVETTPRLAQWRIENLASCTYRKSDPFKIGNWNWHLSVEKNRVLFVKLFPEISNLTRDNPPIASFIVRVVSSVGDRKAITHPEIKDKVLKNNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGGEPCSIWAEGFTQQRSNAKAIESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSLESCQAFLNYLYGIIKHEEFLTHRLALLHAADKYDISDLRDVCHESLLEDIDTKNVLDRLQNASLYQLMKLKMSCIRYLVKFGKIYEIREDFNTFLQNADRDLIAEVFHEVLDAWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0621 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Gso18g0621 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Gso18g0621 328 SUPERFAMILY POZ domain 149 259 IPR011333 -
Gso18g0621 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
Gso18g0621 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Gso18g0621 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Gso18g0621 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Gso18g0621 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0621 Gso-Chr18 6798614 6801107 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gso18g0621 BTB 1.5e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0621 K10523 - gmx:100790186 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0621 18 6798614 6801107 Gso8g2793 8 45699488 45702336 GST
Gso18g0621 18 6798614 6801107 Gso14g1615 14 48160318 48163967 PCT
Gso18g0621 18 6798614 6801107 Gso2g1916 2 43421690 43425576 PCT