Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0616 ATGGCGCCAGCGCTGAACCTCGCCGCCGGAGGAATTCCGCTGAGTTTCTCTTCCTCCGTCGACCGCTCCGCCAGCTTTCCACGGCGGTCCTCGGTCCGCGCCGTCGCGGCTGAGGCGGTGGATACGCAGCGGTCGGCGGCGAGCCTTTACGAGGTGCTGCGAGTCGAGCGAGACGCATCGCCGACGGAGATCAAGTCGGCGTACCGGAGCCTCGCGAAGCTCTACCATCCCGATGCGGCGGTGCAGAGGTCACCGGAGACTGACGGCGACGGAGACTTCATTCAGCTCCGAAACGCGTACGAGACGCTGTCGGATCCGTCGGCGAGGGCGATGTACGATAGGACGCTGGCGGCGGCGCACGGCGGAAGACACCGCCGGTTTTCTAATTCGCTTAGTCGGAACCACTCGTCGGCGTTTTACACGACGCGAAGGTGGGAAACGGACCAATGCTGGTAG 456 0.6491 MAPALNLAAGGIPLSFSSSVDRSASFPRRSSVRAVAAEAVDTQRSAASLYEVLRVERDASPTEIKSAYRSLAKLYHPDAAVQRSPETDGDGDFIQLRNAYETLSDPSARAMYDRTLAAAHGGRHRRFSNSLSRNHSSAFYTTRRWETDQCW* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0616 151 CDD DnaJ 50 105 IPR001623 -
Gso18g0616 151 SUPERFAMILY Chaperone J-domain 46 123 IPR036869 -
Gso18g0616 151 SMART dnaj_3 47 108 IPR001623 -
Gso18g0616 151 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 151 - -
Gso18g0616 151 ProSitePatterns Nt-dnaJ domain signature. 93 112 IPR018253 -
Gso18g0616 151 PRINTS DnaJ domain signature 50 68 IPR001623 -
Gso18g0616 151 PRINTS DnaJ domain signature 68 83 IPR001623 -
Gso18g0616 151 PRINTS DnaJ domain signature 88 108 IPR001623 -
Gso18g0616 151 ProSiteProfiles dnaJ domain profile. 48 116 IPR001623 -
Gso18g0616 151 Gene3D DnaJ domain 33 138 IPR036869 -
Gso18g0616 151 Pfam DnaJ domain 49 113 IPR001623 -
Gso18g0616 151 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0616 Gso-Chr18 6743827 6744668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0616 50 113 C2H2 Transcription Factor Family AT1G74250 45.455 1.66e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0616 - - gmx:100778445 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0616 18 6743827 6744668 Gso8g2787 8 45625894 45627241 GST
Gso18g0616 18 6743827 6744668 Gso14g0095 14 851140 852003 PCT
Gso14g0095 14 851140 852003 Gso18g0616 18 6743827 6744668 PCT