Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0615 ATGGAGACTCCAGTTGAAGTGAAACCTACTCGAGTTGCATCTGGATTCTTAGATGACTTGTCTGAGACTTGCAAGATGGGTACTCCAAACGGAAGAGCAATGTGTAAGTCTGACGATGAAGTTCCTTTTGACTCTGAAATAAATTTTCACCTGTCAGAATCTATTCTGGTGGATGTACGTGGATCACATTCTGGAGAATCTCAGACTGCTCGTCATGAAACGTTGGCGGGTATTATTTACAAGAGCATACGAGTTGTAGTTTTTTCTAACAAACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTGCAGAAGTTGACTGGCCATCTTGGTTGGGTCTTTGGTCTGAGTTTGTTGGGTATAGTGCCTCTGGCGGAGCGGCAGCTAGCATTTTACACCGGAGATACTGTTGGGGGTCTTCTAAATGCTACATTTGGAAATGCGACAGAATTGATCATCTCAATATATGCATTAAAAAGTGGAATGACACGAGTTGTCCAGCTCTCTTTGCTGGGTTCAATTTTGTCCAATATGTTACTGGTGCTTGGATGCGCATTCTTATGTGGTGGGATTGTTAATCACAAGAAGGAACAAGTGTTTAACAAGGCAGCTGCTTCCGTGAACTCAGGATTATTGCTGATGGCAGTCATGGGCATACTTTTTCCTGCTGTTCTACACTACACTCACACTGAGGTCCGTGTTGGGAAGTCAGAGTTGTCACTTTCAAGACTCAGCAGCTGCATTATGCTTGTGGCCTATGTTGCATACCTATTTTTTCAGTTAAAAAGTCAAAGAAGTCTCTATGTCTCTGTGAACGAGGATGAGAGTCAGAATGGAAACAACTCAAATGATGATGAATCCCCAGATATTTCTAAATGGGAAACACTAATCTGGCTTTCGGTTATGACTGCTTGGATATCAATCCTGTCAGAATATTTGGTTGGCGCTATGGAGGGAGCATCTATGGCATGGGAAATTCCAGTAGCATTTATTAGTGTCATATTGCTTCCACTAGTGGGGAATGCAGCCGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGAGTAGCAATTGGGTCATCCACACAGATATCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATAGGGCAACCTATGGACTTAAACTTTCAACTTTTTGAGACTGCAGCACTATTTCTTACTGTTATAGTCGTAGCCTTCATGTTACAGGAAGGAACTGCTAATTACTTCAAAGGGCTAATGCTTATTCTTTGCTATCTGATAGTGGCAGCCAGTTTTTATGTACATGTAGATTCCTCTCAATAA 1344 0.4152 METPVEVKPTRVASGFLDDLSETCKMGTPNGRAMCKSDDEVPFDSEINFHLSESILVDVRGSHSGESQTARHETLAGIIYKSIRVVVFSNKLNLLMPFGPLAILVQKLTGHLGWVFGLSLLGIVPLAERQLAFYTGDTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHKKEQVFNKAAASVNSGLLLMAVMGILFPAVLHYTHTEVRVGKSELSLSRLSSCIMLVAYVAYLFFQLKSQRSLYVSVNEDESQNGNNSNDDESPDISKWETLIWLSVMTAWISILSEYLVGAMEGASMAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWIIGQPMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHVDSSQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0615 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 29 446 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso18g0615 447 TIGRFAM caca2: calcium/proton exchanger 82 439 - -
Gso18g0615 447 TIGRFAM cax: calcium/proton exchanger 96 440 IPR004798 GO:0006816|GO:0015369
Gso18g0615 447 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 29 446 - -
Gso18g0615 447 Pfam Sodium/calcium exchanger protein 299 438 IPR004837 GO:0016021|GO:0055085
Gso18g0615 447 Pfam Sodium/calcium exchanger protein 134 263 IPR004837 GO:0016021|GO:0055085
Gso18g0615 447 Gene3D - 284 441 IPR044880 -
Gso18g0615 447 Gene3D - 135 276 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0615 Gso-Chr18 6723123 6728789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0615 60 447 Antiporters AT1G55730 72.081 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0615 K07300 - gmx:100775769 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0615 18 6723123 6728789 Gso8g2786 8 45610528 45615939 GST