Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0585 ATGAACTTTTTCCCGCTAATAACACAAACCTTATGTCATATATTCTCTTCTTCCTTCACTCCGTTACCAGATCCCATTTTCATTTTCTTCTTCAACCTTGAAAATCCTAATCCCATTTCTCTTCACGGTTCTCTCACCTCCAAAACAATGCCAGTCATCGCCGCCAAGCGCACGTTGCGATCTCACCCTTCCTCGCCCCCTCGCAAATCTCCCCGCCGATGCACAGCCGCAACCCCCAATTCCACCCCTACGAAAAACAGATTGGGTGGCGCCGACGAAAACCAAGCTGATCCGGCAGCTGTGAAACCCAAGTGGAATCCCAAAGATGGTGAGCAATTGAAGAGGGCAAAAATGGCACTGCACTTGTCCACTGCACCGTCTTCGGTTGTGTGCCGCGAGGAGGAGCAGAATATGGTTTTGGAGTTCTGCAAGGGGTGCGTTGAGCACCAGAAGGCTGGGAGTCTCTACATATGCGGGTGTCCCGGAACCGGGAAATCATTATCTATGGAGAAAGTGAAAGATAAATTACTCAATTGGGCTAAGGAGGAAGGTCTTCCACTGCCAGATGTTTTGTCTGTAAATTGTACAACCCTTACCAATACATCAGATATTTTCACTAAGATACTTGGGTTAAACCAAACACAGGGTAAAAAGGTTTCAGCCTTGCCCTTGCAGCAGCTTCAGAACATGTATTCTCAGAAATCATCTGTCAAGAACATGACATTGATAGTAGCTGATGAATTAGATTATTTGATAACCAAAGACAGAGCCGTGCTCCATGATCTTTTCATGCTCACCACCTTTCCTTTTTCTAGATGTATATTAATAGGTGTAGCGAATGCAATTGATCTAGCTGATCGATTTCTTCCAAGGCTTACATCATTGAATTGCAAACCTATTGTTGTAAATTTTCGGGCTTACTCTAAAGATCAGATCCTCAAGATTCTTGAAGAAAGGTTAAATGAATTTCCTTACAGTGTTTTCCAACAGCAAGCCCTGGAACTATGTGCTAGGAAAGTAGCTGCAACTTCTGGAGACATGCGGAATGCTCTTTGTATATGCGGGAGTGCAATAGAGATGCTTGAAGCAGAAATTAGAGAATCTGCCTGCAATTTGAATACCTCATTGGAAGAGATATCATCCTCAAGACAAAATTTTGCAACAGCTCCTGATTTTATGAAAAAACGAGAATTTGATACTGTAAAGACTGATCATATGGCTTGTGCCTTGTCCAAGACATATAGATCACCAGTGGTGGATACAATACAATCTCTGCCACATCATCAGCAGATTGTACTCTGCTCTTCTATGAAACATTTTCGTGGAGCCAAGAAAGATGCAATCCTTGGAGAGTTGTATAAATCGTATGTGGGGGTATGCAAATCTTGTTTAATTCCTCCAGCGGGAATCTTAGAATTTTCAAACATGTGCAGAGTGCTAAATGACCAGGGCCTTATTAAACTTGGACAATCTCGAGAGGATAAATTGAGAAGAGTGTCACCTAAAATAGACGAGGGTGATATTACGTTTGCATTGCAGGGAATACGGTTTTTTCAAAACTGCCTTTAA 1569 0.4257 MNFFPLITQTLCHIFSSSFTPLPDPIFIFFFNLENPNPISLHGSLTSKTMPVIAAKRTLRSHPSSPPRKSPRRCTAATPNSTPTKNRLGGADENQADPAAVKPKWNPKDGEQLKRAKMALHLSTAPSSVVCREEEQNMVLEFCKGCVEHQKAGSLYICGCPGTGKSLSMEKVKDKLLNWAKEEGLPLPDVLSVNCTTLTNTSDIFTKILGLNQTQGKKVSALPLQQLQNMYSQKSSVKNMTLIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLNCKPIVVNFRAYSKDQILKILEERLNEFPYSVFQQQALELCARKVAATSGDMRNALCICGSAIEMLEAEIRESACNLNTSLEEISSSRQNFATAPDFMKKREFDTVKTDHMACALSKTYRSPVVDTIQSLPHHQQIVLCSSMKHFRGAKKDAILGELYKSYVGVCKSCLIPPAGILEFSNMCRVLNDQGLIKLGQSREDKLRRVSPKIDEGDITFALQGIRFFQNCL* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0585 522 MobiDBLite consensus disorder prediction 74 89 - -
Gso18g0585 522 Gene3D - 109 297 IPR027417 -
Gso18g0585 522 SUPERFAMILY "Winged helix" DNA-binding domain 418 521 IPR036390 -
Gso18g0585 522 MobiDBLite consensus disorder prediction 57 108 - -
Gso18g0585 522 PIRSF Cdc6 34 522 IPR016314 GO:0006270|GO:0051301
Gso18g0585 522 Gene3D - 298 421 - -
Gso18g0585 522 SMART Cdc6_C_2 433 512 IPR015163 -
Gso18g0585 522 Pfam CDC6, C terminal winged helix domain 433 511 IPR015163 -
Gso18g0585 522 Coils Coil 358 378 - -
Gso18g0585 522 Pfam AAA domain 150 267 IPR003593 -
Gso18g0585 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 367 IPR027417 -
Gso18g0585 522 Gene3D - 422 508 IPR036388 -
Gso18g0585 522 CDD AAA 135 293 - -
Gso18g0585 522 CDD Cdc6_C 426 508 IPR015163 -
Gso18g0585 522 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 49 520 - -
Gso18g0585 522 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 49 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0585 Gso-Chr18 6237431 6242848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0585 69 522 Core DNA Replication Machinery Family AT2G29680 60.043 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0585 K02213 - gmx:100787371 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0585 18 6237431 6242848 Gso8g2758 8 45329372 45334895 GST