Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0582 ATGGGAGAAGCTGCAAACAAGATCTGCCTTGCCTCACTGAAAAATCAATCATGCCATGTGTTTGGTAATGCTGAGGGGAGAACCAAACTCAACTTGGATCTCAAGCTTGGCCTTTCTGACATTTATTCTGCACAAGCAAGAGACAACCATTACAATAACCATACTTTTAATCAAGTTGAGAAGAATTTCATCCATGGTAGTTCTTCAACTCATGGTGTTGGAATCAATTTCAACACTAACCAAACTTATGAAGGACAAGCAAGTAAACCGGGCTTGGATCTCAACATGGCCACAAAAATGGAGGATCCAAAAAGGCTAAAGAGGATCATGGCAAATCGTATTTCTTCAAGGAGATACCGATTGAAGAAGTTGGACCGCATGGACCAACTGGAAAAACAAATAAAAGCTATCCGGCAACAGATCTCCAACTTGCGTCAACAAATTGGAGAGGCTAAAAATAAGCAACAATCATTGCGGATTGAGCAGCAGCATTTGAAATTCAGAATTGCAGATTTTCAAAACGAGAAAATAGTTAGAGAAGTTGAAATTGGAAACAACATGGAAGAAGTGAAAAGGCTGAGAGAACTCCACATTAATCAATTGCAAACTAATGCACAACCTGCAATGCCTAATTCAGATGATGGTCATGCAGTTGAGGCACAACTCGATCTCAACCTAGGCCTCTAG 687 0.4032 MGEAANKICLASLKNQSCHVFGNAEGRTKLNLDLKLGLSDIYSAQARDNHYNNHTFNQVEKNFIHGSSSTHGVGINFNTNQTYEGQASKPGLDLNMATKMEDPKRLKRIMANRISSRRYRLKKLDRMDQLEKQIKAIRQQISNLRQQIGEAKNKQQSLRIEQQHLKFRIADFQNEKIVREVEIGNNMEEVKRLRELHINQLQTNAQPAMPNSDDGHAVEAQLDLNLGL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0582 228 Gene3D Classic Zinc Finger 98 157 - -
Gso18g0582 228 PANTHER ACTIVATOR OF SPOMIN LUC3 76 207 - -
Gso18g0582 228 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Gso18g0582 228 Coils Coil 120 161 - -
Gso18g0582 228 SUPERFAMILY Leucine zipper domain 104 158 IPR046347 GO:0003700|GO:0006355
Gso18g0582 228 Pfam bZIP transcription factor 104 160 IPR004827 GO:0003700|GO:0006355
Gso18g0582 228 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Gso18g0582 228 PANTHER BASIC LEUCINE ZIPPER 34 76 207 - -
Gso18g0582 228 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0582 Gso-Chr18 6179883 6182674 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0582 99 180 bZIP Transcription Factor Family AT3G58120 31.707 7.64e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso18g0582 bZIP_1 2.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0582 - - gmx:102664304 452.595