Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0549 ATGAAGAAGCTCTCATCAACTTCTTCTCATGCATCCCCATCTTCTTTATCCACCACAAGTTTGGACCCAACTATGTGCACCTCCAAAAGCACCACTTCAGGGTGTCTCACTGCTATCTTGCGCAAAATTCTTTGCTCTGATGGCCTTCCAAGGGACCAAATTAGAGAACTTGATTCATCAAATGCTATGTTGAGTGGCAAAGATCAAAACTTGAAGGCTAAGCAGAATACTGAGATCGATACGACTACTACTACTACTTCTGCTACTAGTATTATTACTACTACTACTACTCCTGGGATAGTGGCGAGGTTAATGGGTTTGGAAACAATTGAGATACCTTGTGGATCAAAACCAAATTCACTTTCGCGTAGCAGATCCATGAATTCTGTGGACTATTTGGGAGTATGCAATGGAATGGAGGAGGTTCTGCATAAGAGGGTTAAGTCCACATTGTCTTTTAGGGAGGCTCCAACTTTTCTTCTACATGAAAGTGACAAGTTTTTGGAGCTAAGTTTTGAAGGTGAAGGTGGTGAGGGTAGAGAATTCAAGTCCAATGGGAGAAAGAGGGAACCGGGTTGTGCAGAATTGAAGCAGAAAGTGCGATCAGAGAGAGGTGAGTTGAGGGAAAACAAAAGAGAAAAAGTGTGTGATGAGAAGGTTTTGATTGAGAAGGGGAAACTTGGAAAAAAAAGGGTCTCTGATGTGTCTAGTGGGAGTGTTGGAAGTGGTGGTAAGCTTCAAGAAATCACAAACACTTTGCATCCTTCCAAGGCTTCTTCTGAAAAGAAGAAGTGTTTTGATGATTATGAAGCAGTGAAATTGTCTCAGAACATGAAGTGCAAGGAAGTTGCGGTTGGTGAAAAGCAGAAGAGGAGGAGGAAAAAGAAGAAAACAATTTGTCAGAAAGAAAACAAGATAGAAGTTGAAACCAAGTCAGAAGATTCAAGCCCAGTTTCTGTCCTTGATTTTGAGCGTGAAGCTTGTGCAACAGTTGGTTTGAGTGCAAGAAGAAAATTGTCACCAAAGCTTGACAATGATCAGCACCTTCCTGTGAGATCTGATGGTAACTTGATGATTGATGATGAGAGTAAGGTTGAGGCAATTGACAACAACAAACATGAAGGGTCAAAGAAAAAAGAGATGAATGGCCAGGAGTATATAGATATTTGGGTTGAAGTTTGCAGAATAGTTGAAGATGAATTGGCTGAATCAAATAAGATACATATATGGACCAATAAACAAGGTGATTTAGGTAGCATAAGTGCGGATTTTGAGTCAGAAATATTTGATCACTTGCTAAATGAGCTTGTGGATCAACTTGCTGGCATCCACTGA 1335 0.406 MKKLSSTSSHASPSSLSTTSLDPTMCTSKSTTSGCLTAILRKILCSDGLPRDQIRELDSSNAMLSGKDQNLKAKQNTEIDTTTTTTSATSIITTTTTPGIVARLMGLETIEIPCGSKPNSLSRSRSMNSVDYLGVCNGMEEVLHKRVKSTLSFREAPTFLLHESDKFLELSFEGEGGEGREFKSNGRKREPGCAELKQKVRSERGELRENKREKVCDEKVLIEKGKLGKKRVSDVSSGSVGSGGKLQEITNTLHPSKASSEKKKCFDDYEAVKLSQNMKCKEVAVGEKQKRRRKKKKTICQKENKIEVETKSEDSSPVSVLDFEREACATVGLSARRKLSPKLDNDQHLPVRSDGNLMIDDESKVEAIDNNKHEGSKKKEMNGQEYIDIWVEVCRIVEDELAESNKIHIWTNKQGDLGSISADFESEIFDHLLNELVDQLAGIH* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0549 444 PANTHER - 1 442 - -
Gso18g0549 444 Coils Coil 193 213 - -
Gso18g0549 444 PANTHER OS05G0128300 PROTEIN 1 442 - -
Gso18g0549 444 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0549 Gso-Chr18 5756440 5758594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0549 28 441 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 27.059 2.79e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0549 - - gmx:102660067 795.038