Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0534 ATGACGGAGTGCATGACGGACTTGGCTCAAGCTGCCGCATGCCGAAACGGCACGACGGCGGCACACTTAAAAGTGATTTCCATCTTTATGATTTTTGTGACCAGCGTGACAGGCGTATGTGCGCCTGTCACACTGGCACGATACTTTCAGGGAAAGTCCCTCTACAACATAGCCATCTTGTTAATCAAATGCTTTGCTGCCGGCGTAATTCTTGCAACCTCATTGGTCCACGTGTTGCCAGACGCCTTTGCTGCACTCTCCGATTGCCAGGTGGCATCCCAGCATCCCTGGAAGGACTTTCCCTTTGCTGGCCTGGTGACCCTTATTGGGGTGCTAATGGCCCTGCTGGTAGACACTGTTGCTAGCTCGCACATGGAGCATGCACACTACACGCCGGTGGAGACGCAGGAGAAGGAGGGTGGCGGCGGCGGCAGCACATGGAGCATTGAGCTTGTTGGTGGTGGTGCTGAAGTGCAGAGGGTTGAAGAGTTGATGAGGTTGAAGCAGAGACTGGTGTCCCAAGTGTTGGAGATTGGTATAATTTTTCACTCTGTTATCATAGGAGTGACTATGGGGATGTCTCAGAACGTTTGCACCATTAGGCCACTCGTTGTTGCTTTGTCCTTTCATCAGATTTTCGAAGGCTTGGGTCTTGGTGGCTGCATTGCTCAGGCTGGATTTAGCTTTGGAACTACAGCGTACATGTGCTTCATGTTCTCTGTGACAACACCAATGGGGATAATTCTGGGGATGGTGTTATTCTCAATGACTGGTTATGATGATACTAACCCTAAAGCTTTGATAATGGAAGGGTTACTAGGTTCAGTTTCATCGGGCATACTAATTTACATGGCTCTTGTTGACCTTATAGCAGTTGATTTCTTTCATAACAAGCTTATGAACTCTAATTTGTACTTGAAAAAGGTGTCTTTTATTGCATTGACTCTTGGCTCTGCTTCAATGTCAGTTCTAGCACTTTGGGCTTGA 987 0.4813 MTECMTDLAQAAACRNGTTAAHLKVISIFMIFVTSVTGVCAPVTLARYFQGKSLYNIAILLIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLIGVLMALLVDTVASSHMEHAHYTPVETQEKEGGGGGSTWSIELVGGGAEVQRVEELMRLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVVALSFHQIFEGLGLGGCIAQAGFSFGTTAYMCFMFSVTTPMGIILGMVLFSMTGYDDTNPKALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNLYLKKVSFIALTLGSASMSVLALWA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0534 328 PANTHER ZINC/IRON TRANSPORTER 3 328 - -
Gso18g0534 328 TIGRFAM zip: ZIP zinc/iron transport family 10 328 IPR004698 GO:0005385|GO:0016021|GO:0071577
Gso18g0534 328 Pfam ZIP Zinc transporter 167 325 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso18g0534 328 Pfam ZIP Zinc transporter 22 135 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso18g0534 328 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 3 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0534 Gso-Chr18 5512888 5515187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0534 1 328 Inorganic Solute Cotransporters AT2G30080 65.607 1.18e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0534 K14709 - gmx:100802186 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0534 18 5512888 5515187 Gso14g1653 14 48611224 48614284 PCT
Gso14g1653 14 48611224 48614284 Gso18g0534 18 5512888 5515187 PCT