Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0526 ATGGAAGAACGGTGGAGATTCATCACCTGGTTGAAGCTCTTCCGCGTGTTTGTGGCTGTTGTGTCTCTATTCCTGTTCATCTTGGAACCTATTTGGTGTTCGACTCTCAACAACGAAGGGTTGGCTCTACAAAAGATGAGGGAGAGGGTGGTGAGAGATCCATTGGGTGCTTTATCAAGTTGGAATAGCAAAGGAGAGATTGATCCCTGTTCCTGGTTTGGAGTAGAGTGCTCCCACGGCAATGTTGTATCCTTGAACTTGAAAGATCTATGTCTTCACGGAACACTAGCACTTGAAATTGGGAAGCTGGTTCACATTAAATCAATCATTTTGCGCAACAATTATTTCTACGGAGACATCCCTAAGGAAATACTACAATTAGAGGACCTGGAAGTTCTTGACTTAGGATATAACAACTTTAGTGGACAATTTCCATTTCATGACCTTGCAACCTATCCATCCCTGACTACCCTTTTATTGGACAACAATGACCATCTTGCCAGCTTAACTCCAGAAGTGTATGAGCTCAAGACATTTTCTGAATTGCATGTAGCTGAAGAACAACTAACTGGTGCCACCACTAGAGAAGCATGTGTTAGGATAACTAATAACTGGCACATTGGCACACATGGGGATATAGCATCCAGAAGGGCACTTCTCCAAGAAGCAAATGGTGAAAAGAGGGGTGATGATGACACAGAAACTCTTTCACCATCACCTTTTCCCTCTACACTATCACCATTTTCTGAGCCTTTCTCACCATCAGAGAGTCCCTCAGATTCACCAATATCATCTCCTGAAGTTTCCCCTTCACCATCCCCATCTCTCTCCAATTTCTTTTTCACTCTCTCACCCTCACCTTCACCTGAGGTAGCACCAACTCCAGACTTGTCACCTCCAGCAAATCCACCTATGGTTGTGTCCACACCACCACAGTCCAATTGGGTTTCAATGCCTTCTCCTGCTTCATCTTCAAACCAAGGGAATGCAAACAGTTCAAATCCAAAGCAACATACCGCGATTATTTGGTCCACAGTTGGGGGATTCTCCTTCTTGATTTTGGTTTCAGCCATTGCTTTTGTTTGCTTCAGAAGTAACAAGGTTGTAACTGTAAAACCTTGGACCACAGGGCTGAGTGGCCAGCTGCAGAAGGCATTTGTATCAGGTGTTCCGAGTCTGAAACGAACAGAACTTGAAGTAGCTTGTGAAGATTTCAGCAACATTATTGGCTCACTTCCTGAGGGGACTATTTATAAGGGGACTCTCTCCAGCGGAGTTGAGATCGGTGTAGCATCCTCTGCAGTGACTTCATCCCAAAACTGGTCCAAAAACATGGAAACTCAGTTTCGGAAGAAGATAGAGATGTTGTCAAGAGTGAACCACAAGAATTTTGTAAATCTTATTGGATATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACCCTATTTGAGCATCTACACATTAGAGAAGCAGAACAACTAGACTGGGGAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGTCTGGAGCACTTGCATCAGCTGACACCACCCATTGCCTACAGAAACATACTATCTTCCTCTATATACCTGACTGAAGATTACGCAGCTAAATTATCAGACCTTAGTTTCTGGACTGATATAGTCTCCACAAAGAAGGGTTCTGAAGCCCCACAGCTGTTGGAAACTCCTTCAGCATATATAAAGGCCAATGTTTACAGCTTTGGAGTACTATTGTTCGAATTAATTACTGGAAGAATTCCCTTTGCCGTGGAGAATGGCTTATTTGAAGATTGGGCGGAGGAATATATGAAGGGGCAACCATTGAGAGACTTGGTGGACACAAGCCTGAACTCTTTGCAAGCAAATGAAATTGAAAAATGGGAAGAAGTGATCAAAAGCTGTGTGCATCCAGATCCAGAAAAAAGGCCAACTATGAGAGAGGTTACTGCTAAGTTGAAGGAAATCACCGCCATGGGGCCGGACGGAGCAACTCCGAAAGCATCTCCTCTTTGGTGGGCAGAAATAGAAATTATGTCCAGTGACTTAAGTTTAGACGTTAAACCATGA 2100 0.4352 MEERWRFITWLKLFRVFVAVVSLFLFILEPIWCSTLNNEGLALQKMRERVVRDPLGALSSWNSKGEIDPCSWFGVECSHGNVVSLNLKDLCLHGTLALEIGKLVHIKSIILRNNYFYGDIPKEILQLEDLEVLDLGYNNFSGQFPFHDLATYPSLTTLLLDNNDHLASLTPEVYELKTFSELHVAEEQLTGATTREACVRITNNWHIGTHGDIASRRALLQEANGEKRGDDDTETLSPSPFPSTLSPFSEPFSPSESPSDSPISSPEVSPSPSPSLSNFFFTLSPSPSPEVAPTPDLSPPANPPMVVSTPPQSNWVSMPSPASSSNQGNANSSNPKQHTAIIWSTVGGFSFLILVSAIAFVCFRSNKVVTVKPWTTGLSGQLQKAFVSGVPSLKRTELEVACEDFSNIIGSLPEGTIYKGTLSSGVEIGVASSAVTSSQNWSKNMETQFRKKIEMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRMRIAMGIAYCLEHLHQLTPPIAYRNILSSSIYLTEDYAAKLSDLSFWTDIVSTKKGSEAPQLLETPSAYIKANVYSFGVLLFELITGRIPFAVENGLFEDWAEEYMKGQPLRDLVDTSLNSLQANEIEKWEEVIKSCVHPDPEKRPTMREVTAKLKEITAMGPDGATPKASPLWWAEIEIMSSDLSLDVKP* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0526 699 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 691 - -
Gso18g0526 699 SUPERFAMILY L domain-like 38 193 - -
Gso18g0526 699 MobiDBLite consensus disorder prediction 236 271 - -
Gso18g0526 699 MobiDBLite consensus disorder prediction 308 335 - -
Gso18g0526 699 MobiDBLite consensus disorder prediction 224 271 - -
Gso18g0526 699 SUPERFAMILY Protein kinase-like (PK-like) 386 663 IPR011009 -
Gso18g0526 699 ProSiteProfiles Protein kinase domain profile. 403 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0526 699 MobiDBLite consensus disorder prediction 288 307 - -
Gso18g0526 699 PANTHER PROTEIN MALE DISCOVERER 2 1 691 - -
Gso18g0526 699 Gene3D Transferase(Phosphotransferase) domain 1 486 672 - -
Gso18g0526 699 Gene3D Phosphorylase Kinase; domain 1 379 485 - -
Gso18g0526 699 Pfam Protein tyrosine and serine/threonine kinase 407 663 IPR001245 GO:0004672|GO:0006468
Gso18g0526 699 MobiDBLite consensus disorder prediction 286 335 - -
Gso18g0526 699 Pfam Leucine rich repeat N-terminal domain 37 78 IPR013210 -
Gso18g0526 699 Gene3D Ribonuclease Inhibitor 35 231 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0526 Gso-Chr18 5383740 5391951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0526 382 666 Receptor kinase-like Gene Family AT1G69730 34.727 2.36e-41 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gso18g0526 PK_Tyr_Ser-Thr 1.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0526 - - gmx:100814122 1297.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0526 18 5383740 5391951 Gso2g1951 2 43855361 43861993 PCT
Gso2g1951 2 43855361 43861993 Gso18g0526 18 5383740 5391951 PCT