Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0525 ATGTCTATGGCTGGTGAGCAAGGTGATAGATGTTCCTCCATCACCATACCCCTTTTGGATGATGAAAAAGTGCACCAAGTGAATGGTTCAGAAGAGGCTTTGGTGGCCAAAACTTGTGATCTACACACAGCTCATGTGGGTAACACCTCCTTTTTCAAGACCTGCTTCCATCTAATTAATGCCCTCTCAGGAGTTGGTATTATTTCCATGCCTTATGCACTGGCATCTGGGGGATGGTTAAGCATATCACTACTATTTGTGATTGCCATTGCTTGCTGTTATACTGGTATGTTGGTCAAAAGATGCATGGATATGGACCCTGACATCAAGAATTTTCCTGACATAGGTCAACGTGCATTTGGAGACAAGGGGAGGATAATAGTATCAATTGCCATGAATTCTGAGCTCTTCCTAGTTGTAACAGGTTTTCTGATTTTAGAGGGTGATAATCTCAACAAACTAGTACCAAACATGCAACTTGAACTTGCAGGGTTAACAATTGGTGGTACAACAATTTTTACCATGATTGCTGCCCTTGTTATTTTGCCTAGTGTTTTGTTAGAGGATTTGAGCATGCTGTCTTATGTCTCTGCTAGTGGGGCTTTGGCTTCTTCAATCTTCCTCCTCTCTATATTTTGGAATGGAACCATTGATGGCACTGGATTTCATGCAAAGGGAACAATTTTCAGATTGAGTGGAATACCTTCTGCTGTCAGCTTATATGCCTTCTGCTATAGTGCTCATCCTATCCTTCCCACTCTCTACAATTCTATGAGAGACAAAAGTCAGTTCTCTAGGGTTCTGTCTATATGCTTTTCAGTATGCACCCTTGGTTATGCAGCAGCAGGTGTTTTGGGCTACTTAATGTTTGGACAAGAGGTTGAATCACAAGTGACTTTGAACCTCCCAACAGGCAAGTTCAGTTCACATGTAGCAATATTCACTACCTTGGTCAATCCTATAACCAAATATGCATTGATGCTTACCCCAGTCATTTATGCTGTAAAAAACAAGGTTTCATGGCATTACAACAAAAGGTCTACACATATGTTTGTTAGTACTTCCATGCTCATTAGCACTCTTATTGTAGCCGTGGCCATTCCCTTGTTTGGATATCTCATGTCACTCATTGGGGCATTGCTAAGTGTCTCAGCTTCAATTTTAGTGCCATCAGTGTGCTACTTGAAGATCTCAGGAGCTTACAAGAGATTTGGGTCTGAAATGATCATCAACTATTCAATAATAATAATGGGGGTCACTATTGCTGTAGTGGGTACTTATACATCTCTTGTAGATATAGTTCATAATTTGTAA 1314 0.4064 MSMAGEQGDRCSSITIPLLDDEKVHQVNGSEEALVAKTCDLHTAHVGNTSFFKTCFHLINALSGVGIISMPYALASGGWLSISLLFVIAIACCYTGMLVKRCMDMDPDIKNFPDIGQRAFGDKGRIIVSIAMNSELFLVVTGFLILEGDNLNKLVPNMQLELAGLTIGGTTIFTMIAALVILPSVLLEDLSMLSYVSASGALASSIFLLSIFWNGTIDGTGFHAKGTIFRLSGIPSAVSLYAFCYSAHPILPTLYNSMRDKSQFSRVLSICFSVCTLGYAAAGVLGYLMFGQEVESQVTLNLPTGKFSSHVAIFTTLVNPITKYALMLTPVIYAVKNKVSWHYNKRSTHMFVSTSMLISTLIVAVAIPLFGYLMSLIGALLSVSASILVPSVCYLKISGAYKRFGSEMIINYSIIIMGVTIAVVGTYTSLVDIVHNL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0525 437 Pfam Transmembrane amino acid transporter protein 48 429 IPR013057 -
Gso18g0525 437 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 3 435 - -
Gso18g0525 437 PANTHER OS05G0424000 PROTEIN-RELATED 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0525 Gso-Chr18 5361575 5365214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0525 40 434 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.293 1.16e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0525 K15015 - gmx:100784690 855.899