Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0521 ATGGCCGCAGCGTTGGAGTGCTGGTCGCGCCGCGCCACCACCACCGTCCACGAGGACCACGCGCTTCTCATGCAGCGACCCGAACAGGACACAACACCCAGAGACTCTTCTTCATCTTCTTCTTCTTCCCTCGTCCACAAGAAGCTTCAAAAACTCACGCGCAACGTCTCCGAAGCCATTGCTTCCCTCAAAAACTCCCTCAACAGCACCATCAACGTCGAATCCTCCAAACTCGACGGGCCTCGCAGCCTCGTGTGGACCACCGTCCTCCGCAACCTCACGCACCTCTACCCCGGTTCCCAGCTCCCGGAGAAGTTAGTCTGCAACATTCGCAAGCACTACGATTCCTTGCCTCTCAGTTATTCTCAGGCGGGGTTTGATGTGAAGGATGTGTTTCTTCACATGAAGCTGATGGAGCAAGCTTTAGAGGACGAGCAGGCTGCTATTTTGATTCAAGAGGAGTGTGATGGTGAGATCCAGCTTCAGGGGTCTGTGTTCAAGTTAACATTTGCTTGCAACTCCCCAATTTCGTGGCCTTTGATGTCGGGTGCGTTGGATGGTTACTCCATTTGCTGCAAGAAGATTCAGATCTTTGAGAAGAAAGGTTTCACCCTTGGGATTGTGCTGCTTCTTGTTCTTTCTGGGGGTGGCCAAGATAAGTTGGTCAGGACCCGGGTTGAAAGCGCTCTCAAGATTGCCATGAAGAGGCTGAAAACCGGTGGCGTGAAGCTGCCCTTTGGGCTTTGTGGATGTCAAGAGGAGAACTCCAAGGGGAGAGGACTTGGAGAGATTGAAGAAGATGGAGGGGATGCATATTGTGGAAATGGATTTGAGAATTTAAGCCAAAATATTCAGCTTCGTGTGCCATTGCCTAGTTCATCTTTTCTTGTAGTCATAGATGAGTGGCAGACTATTCAATCCGGTGGGGATGAGATTGAAAAATGGTTGTTGAACTCAGATAGTCTTGAGTTTGTAGAACAGATTGCGCCCAATTCGTATAAGGGGACGTACATGGGGAAAAGGGTTGGCATTGAGAAGCTTAGAGGGTGTGAGAAAGGGAACTCTTATGAGTTTGAGCTCAGGAAAGATCTGCTGGCACTGATGACTTGTGGGCATAGAAATATTATGCAGTTTTGTGGTGTTTGTGTAGATGACAACCATGGGTTATGTGCAGTGACAAAATTTGTTGAAGGTGGATCTGTTCATGACTTAATGTTAAAGAACAAGAAGCTTTCGAGTAAGGATGTTGTAAGAATTGCAGCTGATGTAGCTGAGGGGATCAAGTTTATGAATGATCACGGTGTTGCATACGGAGATCTTAATACGCAGAGGATTCTGTTGGATAAGCATGGGAATGCTTGCTTGGGTGATATGGGCATTGTCACTGCCTGCAAGAGTGTCAGAGAGGCAATAGATTATGAAACTGATGGTTATCGATGGCTCGCACCAGAGATAATTGCTGGTGATCCAGAGAGTGTGACAGAGACATGGATGAGTAATGTTTATAGTTTTGGCATGGTAATTTGGGAGATGGTAACCGGTGAGGCAGCATATTCTGCATTTTCACCAGTTCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTAAGACCTGAAATCCCCAAGGACTGCCCTCAAACTCTAAAGTCTCTCATGACAAAGTGTTGGAACAACACCCCTTCAAAACGCCCCCATTTTTCTGAAATTTTGGCCATATTGCTACGACCAAGCAACTACAATAGGTAA 1743 0.475 MAAALECWSRRATTTVHEDHALLMQRPEQDTTPRDSSSSSSSSLVHKKLQKLTRNVSEAIASLKNSLNSTINVESSKLDGPRSLVWTTVLRNLTHLYPGSQLPEKLVCNIRKHYDSLPLSYSQAGFDVKDVFLHMKLMEQALEDEQAAILIQEECDGEIQLQGSVFKLTFACNSPISWPLMSGALDGYSICCKKIQIFEKKGFTLGIVLLLVLSGGGQDKLVRTRVESALKIAMKRLKTGGVKLPFGLCGCQEENSKGRGLGEIEEDGGDAYCGNGFENLSQNIQLRVPLPSSSFLVVIDEWQTIQSGGDEIEKWLLNSDSLEFVEQIAPNSYKGTYMGKRVGIEKLRGCEKGNSYEFELRKDLLALMTCGHRNIMQFCGVCVDDNHGLCAVTKFVEGGSVHDLMLKNKKLSSKDVVRIAADVAEGIKFMNDHGVAYGDLNTQRILLDKHGNACLGDMGIVTACKSVREAIDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSAFSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPHFSEILAILLRPSNYNR* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0521 580 Gene3D Transferase(Phosphotransferase) domain 1 316 576 - -
Gso18g0521 580 ProSiteProfiles Protein kinase domain profile. 284 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0521 580 PANTHER SERINE-THREONINE PROTEIN KINASE 1 576 - -
Gso18g0521 580 Pfam Protein tyrosine and serine/threonine kinase 357 571 IPR001245 GO:0004672|GO:0006468
Gso18g0521 580 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 576 - -
Gso18g0521 580 MobiDBLite consensus disorder prediction 18 49 - -
Gso18g0521 580 MobiDBLite consensus disorder prediction 29 49 - -
Gso18g0521 580 PRINTS Tyrosine kinase catalytic domain signature 393 406 IPR001245 GO:0004672|GO:0006468
Gso18g0521 580 PRINTS Tyrosine kinase catalytic domain signature 429 447 IPR001245 GO:0004672|GO:0006468
Gso18g0521 580 PRINTS Tyrosine kinase catalytic domain signature 499 521 IPR001245 GO:0004672|GO:0006468
Gso18g0521 580 PRINTS Tyrosine kinase catalytic domain signature 543 565 IPR001245 GO:0004672|GO:0006468
Gso18g0521 580 SUPERFAMILY Protein kinase-like (PK-like) 326 572 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0521 Gso-Chr18 5291923 5296278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0521 305 572 MAP Kinase Kinase Kinase AT2G17700 32.234 7.83e-49 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Gso18g0521 PK_Tyr_Ser-Thr 5.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0521 - - gmx:100811417 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0521 18 5291923 5296278 Gso2g1955 2 43900594 43905666 PCT
Gso2g1955 2 43900594 43905666 Gso18g0521 18 5291923 5296278 PCT