Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0514 ATGGGGGGTACCTCACCTTGTGCTTCTTGCAAGTTGTTGAGACGTCGTTGCTCCAAGGAATGTATCTTTGCTCCTTACTTTCCTTCTGATGACCCTCGCAAGTTTGCCATTGTGCATAAGGTGTTTGGTGCTAGCAATATCAGCAAAATGCTGCAGGAGCTTCCAATTCATCAAAGAGCAGATGCTGTGAGCAGTTTAGTTTATGAGGCAAATGCAAGAGTGAGAGACCCAGTGTATGGATCTGTTGGAGCCATATCATACCTACAAAGCCAAGTTTCACAATTGCAAATGCAGCTTGCAGTGGCTCAGGCAGAGATTCTATGTATCCAGATGCAGCAGCAAGAGCCTACCTTAGCCACACAATTAGTAGACCAAGATGACAAATCAATGCTCCTATCTGTAAACAACAACTATGAAATGCTTCCTCAGTTTCTTAACTTTCCTTCATCTTCCTCCTCATCTTCCAATATATTCCAAGACCCTCATGAGCCTCTTAAGAGAGAGTCTTTTTGGACTTAA 519 0.4335 MGGTSPCASCKLLRRRCSKECIFAPYFPSDDPRKFAIVHKVFGASNISKMLQELPIHQRADAVSSLVYEANARVRDPVYGSVGAISYLQSQVSQLQMQLAVAQAEILCIQMQQQEPTLATQLVDQDDKSMLLSVNNNYEMLPQFLNFPSSSSSSSNIFQDPHEPLKRESFWT* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0514 172 Coils Coil 85 105 - -
Gso18g0514 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 169 - -
Gso18g0514 172 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Gso18g0514 172 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Gso18g0514 172 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 2 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0514 Gso-Chr18 5203244 5204288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0514 3 172 AS2 family AT2G30130 64.211 7.36e-77 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso18g0514 LOB 1.8e-41 No_clan