Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0513 ATGTCGAAGGTGGTTTGTGTCACCGGAGCCAGTGGCGCCATTGGATCATGGGTGGCCCTCCTCCTCCTCCAGCGTGGTTATACGGTCCATGCCACCGTCCAAGACATCAAGGATGAAAATGAGACGAAACATTTGGAGGAAATGGAAGGAGCAAAGAGTCGTCTCCATTTTTTTGAAATGGATCTTCTTGACATCGACTCCATTGCCGCTGCCATAAAGGGTTGCTCCGGCGTAATCCACCTCGCATGTCCTAACATCATCGGTCATGTCGAAGATCCTGAGAAGCAGATACTGGAGCCGGCGATAAAAGGAACAGTTAATGTGTTGAAGGCGGCGAAGGAAGCGGGGGTGGAGCGCGTGGTGGCGACTTCGTCGATCTCATCCATTATGCCAAGCCCTAACTGGCCAGCTGATAAGATTAAGGCAGAAGAGTGTTGGACAGACCTTGAATACTGCAAACAGAAGGGGTTGTACTATCCCATTGCAAAGACTCTAGCAGAGAAAGCGGGTTGGGAATTTGCAAAGGAGACAGGTTTTGATGTTGTCATGATAAACCCTGGTACAGCTTTGGGCCCTCTGCTTCCACCAAGAATCAATTCAAGCATGGAAATGCTTGTTAGTGTTCTCAAAGGGGGCAAAGAGACGTACGAGGACTTCTTTATGGGAATGGCTCACTTCAAAGACATAGCATTGGCACATATTTTGGCACTTGAGAACAAGAAAGCAGCAGGAAGGCACTTGTGTGTGGAATCTATTCGTCACTTTAGTGATCTTGTGGACAAGGTTTCTGAGTTATACCCTGAATACGATGTGGTCAAGTTGCCAAAGGATACCCAGCCAGGGTTGTTGAGGGCAAGTACAAAGGATGCATCAACAAAGCTGATTGATTTAGGTCTAGAGTTCACTCCTGTAGACCAAATCATCAAGGATGCAGTGGAGAGTCTGAAGAGCAAGGGCTATGTCTGA 966 0.4793 MSKVVCVTGASGAIGSWVALLLLQRGYTVHATVQDIKDENETKHLEEMEGAKSRLHFFEMDLLDIDSIAAAIKGCSGVIHLACPNIIGHVEDPEKQILEPAIKGTVNVLKAAKEAGVERVVATSSISSIMPSPNWPADKIKAEECWTDLEYCKQKGLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALGPLLPPRINSSMEMLVSVLKGGKETYEDFFMGMAHFKDIALAHILALENKKAAGRHLCVESIRHFSDLVDKVSELYPEYDVVKLPKDTQPGLLRASTKDASTKLIDLGLEFTPVDQIIKDAVESLKSKGYV* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0513 321 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 313 - -
Gso18g0513 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 315 IPR036291 -
Gso18g0513 321 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 313 - -
Gso18g0513 321 CDD FR_SDR_e 5 299 - -
Gso18g0513 321 Pfam NAD dependent epimerase/dehydratase family 5 245 IPR001509 -
Gso18g0513 321 Gene3D - 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0513 Gso-Chr18 5182018 5186958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0513 3 321 Monolignol Biosynthesis Gene Families AT5G58490 65.517 2.03e-163 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0513 - - gmx:100137082 636.721