Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0503 ATGTCTCATAACCACTCTCATGCATCTCCAATATCGATGAAAGTAGGCCAGGACGACAACCTCATTCACAATGCCATGCATGCTGGAATTACCAAGGCAGAAACGTTGTTTGGAGGTTCTTTCATATGCCACAGTACAGCTAATCAAATCAACTCCAAGGGAATCTGGTTTGGAGATGACCCTCTTGCATATTATCTCCCTGTCTTCTTGCTCCAACTTTGCCTCATATTCATCTTTACCCATTTCATTCATCTTATTCTCAAGCCATTTGGTCAACCGTCTTTTGTTTCTCAGATTATTGGTGGTGTGACTTTAGGTCCTTCTATTCTTGGGCGGAACACAGCATTCATTGACAAGGTTTTCCCATCAAAAGGAAGAAATGTGATTGATACCATGGGCTTTTTCGGTTTTATGTTATTTGTCTTCTTAACTGGGGTAAAGATAGATCCAACCATCACTTTTAGATCAGGCAAAAGGACTTTTGCCATAGGAATTTTAGGCTACTTTGTTCCTTACACTTTTGCCAAAACGGTTGTCTTTATGCTCACACGCTTTGCAACATTGGATAGTGATGTCTCTAAGGTGCTTCCTATTGTGATAGAAATTCAATGTATCTCAGCCTTTCCAGTAATTACTCGTTTTCTTGTTGAGCTTCAGATCCTCAATTCAGAGATTGGGCGATTGGCCACTTCTTCTTCATTAGTGTGTGATATTTGTTTCCTTTTTGTTATGACAATAAAGTTTGTTGCAAGGTTATCCTCCACAAAGTCAATAGGAACATCTATTGGATCTTTCTTGTCCCCCACGCTATTTCTTATATTCATCATCTTTGTAGTTCACCCAGCTGCAATATGGGCAATTCGACAATCACCAGAAGGGAAACCTGTTCAAGAAATTTATATATGTGGTGTTTTTCTAACACTAATATTTTGTGGATTCTTAGGTGAAGTTTTTGGCCTAAATGCGATTGTTGTATCTTTCTTTGTGGGGCTGGCTATACCAGATGGTCCACCATTAGGAGCGGCATTGGTAAATAAGCTTGATTCCTTTGTTTCAGTGGTGTTCGTGCCTATCCTTTTTATAATAGTTGGATTAAGGACAGATGTGTACGCCATACAGAAGATGAAGAACATAGCTACAATTCAATTCATTATCTGCATTGCTTTTTGTGGGAAAGTTTTAGGGGCTTTATTACCTCTCATCTTCCTTAGGATGCCATTCCGAGATGCCTTTGCTCTTGGTCTTATAATGAACTGCAAAGGCACTATTGAATTGTACTTGTTGATTAGCTTGAAATTAAAAAAAGCCATGAATGATGAATGCTTTACAATTTTGGTTCTTACTTTAGTGCTTGTAGCCGGGATTGTGTCACCTATTGTGAAAACTCTATATGATCCTTCTAAGAGGTTTCTTGCTTACAAAAGGAGGACAATTATGCATCACAGAAAGGATGAAGAACTACGCATACTAGCTTGTATTCATAGACATGATAATGTTTTGGCTATTATGAACCTCCTTGCAGCTTCCAACCCCACTAAAGCAAGCCCTATTAACTTAGTTGTGCTTCAGCTTATCAAGCTTGTGGGGAGATCTTCCTCTCTTCTTGTTGCACACGTGCCGCGAAAAATGCTTAGTCACCATTCTACTCAAACTGAAAAGATTTTCAACTCATTCAACAAGTTTGAAGATGTATACAAGGGCAAGGTCACACTACATTCCTATAAGGGCATTTCTCCTTATGCTACAATGCACAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTTATCATCATACCTTTTCATAAGCAATGGATACTTGGAGGGACAACTGAGTCATCTTTTGCTTTTAAGCAGCTCAATAAGAATGTCCTAGAGAAAGCTCCTTGCTCAGTTGGTGTCCTCATTGATCGTGGTAACCAAAAGATGTTTTGGTGTGGCTTCAAAAAGGGATCAATATATCAAGTAGCTATGCTCTTCTTTGGTGGTGCAGATGATCGAGAAGCACTTTCATATGCGAGACGCATGTTAGATCAACCTTATGTACATATTACTCTTTTTCATTTCTCATCTCCAACTGAGATTGTTGGAGGAACAGAAAGGAGCAAAATGCTTGACACACAGATCTTGAGTGAGTTTAGGCTTAAGGCTTTTCGGAATGAGAGAGTTTCTTACAAAGAGGAGATGGTAATGGATGGAAAGGATGTACTTTCAGTTATTGAATACATGGAGAGTTGTTATGACCTTGTCATGGTTGGGAGGAAGCACGCAGATTCAAAATTAATGTCAGAAATTGGAAAATGGAAGCATGGAGAATTGGGAATTATAGGAGAGATTCTTGCCTCTTTAAATATAGGAGCCAAAACATCAATTTTAGTTGTGCAACAACAAACCAGATTTTGGGGATCACGTGATCCAGAAGAATCCACACATTTGAGAAAAGAAGATATATAG 2460 0.3886 MSHNHSHASPISMKVGQDDNLIHNAMHAGITKAETLFGGSFICHSTANQINSKGIWFGDDPLAYYLPVFLLQLCLIFIFTHFIHLILKPFGQPSFVSQIIGGVTLGPSILGRNTAFIDKVFPSKGRNVIDTMGFFGFMLFVFLTGVKIDPTITFRSGKRTFAIGILGYFVPYTFAKTVVFMLTRFATLDSDVSKVLPIVIEIQCISAFPVITRFLVELQILNSEIGRLATSSSLVCDICFLFVMTIKFVARLSSTKSIGTSIGSFLSPTLFLIFIIFVVHPAAIWAIRQSPEGKPVQEIYICGVFLTLIFCGFLGEVFGLNAIVVSFFVGLAIPDGPPLGAALVNKLDSFVSVVFVPILFIIVGLRTDVYAIQKMKNIATIQFIICIAFCGKVLGALLPLIFLRMPFRDAFALGLIMNCKGTIELYLLISLKLKKAMNDECFTILVLTLVLVAGIVSPIVKTLYDPSKRFLAYKRRTIMHHRKDEELRILACIHRHDNVLAIMNLLAASNPTKASPINLVVLQLIKLVGRSSSLLVAHVPRKMLSHHSTQTEKIFNSFNKFEDVYKGKVTLHSYKGISPYATMHNDVCYLALEKRTTFIIIPFHKQWILGGTTESSFAFKQLNKNVLEKAPCSVGVLIDRGNQKMFWCGFKKGSIYQVAMLFFGGADDREALSYARRMLDQPYVHITLFHFSSPTEIVGGTERSKMLDTQILSEFRLKAFRNERVSYKEEMVMDGKDVLSVIEYMESCYDLVMVGRKHADSKLMSEIGKWKHGELGIIGEILASLNIGAKTSILVVQQQTRFWGSRDPEESTHLRKEDI* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0503 819 Pfam Sodium/hydrogen exchanger family 75 460 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso18g0503 819 PANTHER OS08G0117800 PROTEIN 39 804 - -
Gso18g0503 819 Gene3D - 68 470 IPR038770 -
Gso18g0503 819 PANTHER CATION/H + ANTIPORTER 39 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0503 Gso-Chr18 5060704 5064922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0503 31 813 Antiporter Super Family AT2G13620 37.978 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0503 - - gmx:102665255 1602.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0503 18 5060704 5064922 Gso14g1687 14 48972823 48975423 PCT
Gso14g1687 14 48972823 48975423 Gso18g0503 18 5060704 5064922 PCT