Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0497 ATGGCAAACCTAAAGACACACCTTGTCCTTAATATGAAGGATGTTGTGATAGTTAAACCCTCCAAGCCCACACCATCTGAACTTCTTTCTTTGTCCACCATTGACAGTGATCCAGTTCTCAACATTCTGTGTCAAACCATTTACGTCTACAAAGCAAATCTTGATTCCCCAAATGATCAACTAGACCCTGTAAATGTGATAAAAGAAGCTCTCTCAAAGGCCTTGGTTTACTATTATCCACTTGCTGGGAAGATAGTAACATTTGATGATGGAAAACTTGGAATCAACTGCAATGCTGATGGAGTTCCATTCTTGGAGGCAACTGCTGACTGTGAACTCTCTTCTCTTCACTACCTTGAAGGGATTGATGTTCCAACTGCACAGAAACTGGTGTTTGATAACCCTAATTCTCAAGATGAAGCTAGTGATCACCCTTTGGTTTTTAAGGTGACCAAGTTTCTCTGTGGGGGTTGCACCCTTGGAATGGGCTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATCTCAGTTCTTCAGAGCCTTGGCTGAACTTGCATGTGGAAAAAGTGAGCCCTCAGTGAAACCTGTGTGGGAGAGGGAGAGACTAATGGGGACACTTCTTAAGGAGCCACTCCAATTTCCTATAGATGAGGCTTCAAGGGCAGTTTCACCATTTTGGCCAACCAAGGAGATTTCACATGAATGCTTTAACTTAAACGGTAAGAGCATACAAAGACTCAAAATGGAACTGATGAAGGAAAGTGATGATGTAAAGGAAAGCTTCACAACTGTTGAAGCACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGGAATTGAGCTCTGATGGGAAAACTATGCTGTGTTTAGCAGTAGGGGTGAGGCACCTATTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCCTTTGTGGGTTCAAATGTGGTGCTGACAGTGAAAGAACTTGATGAAAACCCACTCTCAGAGGTTGTGAAGCTCATCAAAGAGAGCAAAAAGCTTCCTTCTAGTAATGAGTACATCAGAAACACTATAAACATGTTGGAGACAATGAGACAAAGGAACATTAGGGTTGAAGGAACATGTGCATCTGTGGTGTTAACAGATTGGAGGCAGCTGAGTTTGATGGAAGAAGTGGATTTTGGATGGAAGGCTTCAGTGAATATAGTACCAGTTCCATGGAACATTTTAGGGTATGTGGACTTGTGCCTTTTCTTGCCTCCTAGTAACTTGGATCCTTCAATGAAAGGAGGAGTTAGGGTCTTTGTTTCCCTCCCCAAAGCTTCCATGCCAAAGTTCAGGGAGGAGATGGAGGCCCTCAAGCTTATGAGAGGTGATGAGGGTAGCACCCAGCAATAA 1383 0.436 MANLKTHLVLNMKDVVIVKPSKPTPSELLSLSTIDSDPVLNILCQTIYVYKANLDSPNDQLDPVNVIKEALSKALVYYYPLAGKIVTFDDGKLGINCNADGVPFLEATADCELSSLHYLEGIDVPTAQKLVFDNPNSQDEASDHPLVFKVTKFLCGGCTLGMGLSHSVCDGFGASQFFRALAELACGKSEPSVKPVWERERLMGTLLKEPLQFPIDEASRAVSPFWPTKEISHECFNLNGKSIQRLKMELMKESDDVKESFTTVEALGAYVWRSRARALELSSDGKTMLCLAVGVRHLLDPPLPEGYYGNAFVGSNVVLTVKELDENPLSEVVKLIKESKKLPSSNEYIRNTINMLETMRQRNIRVEGTCASVVLTDWRQLSLMEEVDFGWKASVNIVPVPWNILGYVDLCLFLPPSNLDPSMKGGVRVFVSLPKASMPKFREEMEALKLMRGDEGSTQQ* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0497 460 Gene3D - 7 210 IPR023213 -
Gso18g0497 460 Pfam Transferase family 16 447 - -
Gso18g0497 460 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 449 - -
Gso18g0497 460 Gene3D - 227 445 IPR023213 -
Gso18g0497 460 PANTHER ACYL TRANSFERASE 4 5 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0497 Gso-Chr18 5005633 5007292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0497 10 443 Monolignol Biosynthesis Gene Families AT5G48930 28.125 5.96e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0497 K20240 - gmx:100801843 925.62