Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0493 ATGCCTTCTACTACTCTTCAATGGCTAAGCCTTGTTGGCATCATTTGGCTCCAAGCCATAATTGGCACAAACACTAATTTCCCTACTTACTCTTCTCAACTGAAGCAACTTCTATCTATTTCCCAAGTTCAACTCAATAACCTTGCTTTTGCCTCTGATGCAGGCAAGCTTTTTGGCTGGTTTTCTGGCCTTGCTTCTATATACCTCCCCCTTTGGTTAGTCCTCTTGATTGGTTCAACTCTTGGGTTAGTTGGTTATGGTGTGCAATATCTCTACATAACCAACCAAATCTCCTCTTTGTCCTATTGGCATGTGTTCTTGCTAACTTTTCTTGCTGGCAATAGCATTTGTTGGATAAACACAGTGTGCTATGTTGTCACCATAAGGAACTTCTTTTCTGATCGCGAAGTTGCCGTGGGAATGACAACTAGCTACCAAGGACTAAGTGCAAAGATTTATGCCAACATTGTTGATGCTGTTTCTCCTCACAAGAAGGCTAGTGCCTTTATCTTCCTTAACTCTCTCTTACCTGTGATAGTTGGTTTAATAGCAGCTCCTCTAGTCAGAGAAATTGATGAAGAAGTCACAAGTCCTAAGCACACGCGTGTTGGTTTTGGTGTGATGTTTGTTATTACCATTTCAACTGGAATATATGCTGTGTTGAGCAGCTTGCAGTTTGTCACAAGCAAAGTATCCTCACTAGGCACCTTGGTTGGTATTCTAGTGACCCTTCTCTTGCCTCTACTAGTCCCTCTTTCAGTGAAGATCAAGGAGCTTCAGGAAAACACAGAAAAAGTGAGAATCTACCATTTTACTATGGAGGAGAATACTACTAGTGAAGAGAGGGTGGAGAATGAGGTGAAAGAGGGTGAAGTTCAAGAAGAGGTTGGTATTATAGAAGAAGTTGGAGTGAAGTTGATGCTGAGAAGAATAAATTTCTGGTTATATTTCTTTGTCTATTTTTTTGGTGCAACAGTTGGTTTAGTATATCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTAATATTTCATCTTTGGTGTCTTTGTCATCATCGTTTGGGTTCTTTGGCCGTCTCATGCCATCTCTTATGTACTACTTCTACAGGGGAAAATGTAGAATTTCAAGACCTGCTTCTATGTTGGCAGCGATGGTTCCAATGTCAGGTGCATTTTTCTTACTTCTCAACAAAACAGACATTGTCCTCTACACCAGCACTGCAGTGATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACAACTACTGAGCTATTTGGTACTAATCATTTCTCAGTGAATCATAATGTGGTGGTGGCCAACATTCCTATTGGATCCCTTATATTTGGCTACTCAGCTGCACTTATTTACCGTAAGGAAGGGCATGAACATGATGAGCATGTGAAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATGTGGGGTTCCTTTTGTTTCCTTGGAACTCTTTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTTCTCACAAAAACAATAG 1545 0.4091 MPSTTLQWLSLVGIIWLQAIIGTNTNFPTYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASIYLPLWLVLLIGSTLGLVGYGVQYLYITNQISSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFFSDREVAVGMTTSYQGLSAKIYANIVDAVSPHKKASAFIFLNSLLPVIVGLIAAPLVREIDEEVTSPKHTRVGFGVMFVITISTGIYAVLSSLQFVTSKVSSLGTLVGILVTLLLPLLVPLSVKIKELQENTEKVRIYHFTMEENTTSEERVENEVKEGEVQEEVGIIEEVGVKLMLRRINFWLYFFVYFFGATVGLVYLNNLGQIAESRGCSNISSLVSLSSSFGFFGRLMPSLMYYFYRGKCRISRPASMLAAMVPMSGAFFLLLNKTDIVLYTSTAVIGVCTGAITSIAVSTTTELFGTNHFSVNHNVVVANIPIGSLIFGYSAALIYRKEGHEHDEHVKCMGMECYRNTFIMWGSFCFLGTLLALILHARTRKFFSQKQ* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0493 514 CDD MFS_Mch1p_like 6 496 - -
Gso18g0493 514 Gene3D MFS general substrate transporter like domains 156 506 IPR036259 -
Gso18g0493 514 Pfam Nodulin-like 7 251 IPR010658 -
Gso18g0493 514 SUPERFAMILY MFS general substrate transporter 8 508 IPR036259 -
Gso18g0493 514 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 513 - -
Gso18g0493 514 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0493 Gso-Chr18 4978048 4980551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0493 1 513 Nodulin-like Gene Family AT2G30300 48.467 8.87e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0493 - - gmx:100800763 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0493 18 4978048 4980551 Gso14g1697 14 49097406 49099636 PCT
Gso18g0493 18 4978048 4980551 Gso2g1981 2 44218099 44220256 PCT
Gso14g1697 14 49097406 49099636 Gso18g0493 18 4978048 4980551 PCT
Gso2g1981 2 44218099 44220256 Gso18g0493 18 4978048 4980551 PCT