Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0490 ATGGCTTTCCATTCACTACGTTATAACGTATTTTGCTTCTCTATTTTGTTTTCTCTACTTATTGCCTTAGCCTCTGCTGAGCTATCTTCAGATTTCTATGCATCAACATGCCCCAATGCCCTCTCTACCATAAAATCTGCAGTGAAAAGTGCAGTTGCTAAAGAGCATCGCATGGGAGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTAATGGATGTGATGCATCAGTTCTTCTAGATGACACTTCGAGCTTCACGGGAGAAAAGTCAGCTGCTGCAAATTTGAATTCTTTGAGGGGTTTTGATGTAATTGACGACATCAAAAGTCAGTTGGAGAGTGCTTGTCCAGGAATTGTTTCCTGTGCAGATATTGTTGCTGTTGCTGCACGAGATTCTGTCGTAGCATTGGGTGGTCCATCATGGACAATAGGGTTAGGGAGAAGAGATTCAACCACTGCAAGTAAAGATGCTGCCACTAGTGATATCCCATCCCCTCTAATGGATCTCAATGATCTCATATCTGCCTTTTCAAACAAGGGGTTTACCTCCCAAGAGATGGTAGTCCTCTCAGGAGCTCATACAACAGGGCAAGCCAAATGCCAATTCTTCCGGGGTAGGATTTACAATGAGACCAACATTGATTCAGATTTTGCAACATCAGCCAAGTCAAATTGTCCAAGCACTGATGGTGACAGCAACCTCTCCCCACTTGATGTCACCACCAATGTGTTATTTGACAATGCTTATTTCAAGAACCTTGTGAACAAGAAAGGGCTTCTACATTCTGATCAGCAACTTTTCAGTGGCGGTTCTACTGATTCTCAGGTCACTACCTACAGCACTAGCTCTTCAACTTTCTATGCAGACTTTGCCAGTGCTATGGTCAAAATGGGAAACCTCAGCCCTTTAACAGGAAGCAGTGGCCAAATTCGTACTAACTGCCGCAACGTTAACTAA 963 0.4351 MAFHSLRYNVFCFSILFSLLIALASAELSSDFYASTCPNALSTIKSAVKSAVAKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAAANLNSLRGFDVIDDIKSQLESACPGIVSCADIVAVAARDSVVALGGPSWTIGLGRRDSTTASKDAATSDIPSPLMDLNDLISAFSNKGFTSQEMVVLSGAHTTGQAKCQFFRGRIYNETNIDSDFATSAKSNCPSTDGDSNLSPLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSSSTFYADFASAMVKMGNLSPLTGSSGQIRTNCRNVN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0490 320 ProSiteProfiles Plant heme peroxidase family profile. 27 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 Gene3D - 31 317 - -
Gso18g0490 320 PANTHER PEROXIDASE 72-RELATED 20 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gso18g0490 320 Gene3D Peroxidase, domain 2 165 299 - -
Gso18g0490 320 CDD secretory_peroxidase 27 317 IPR033905 GO:0004601|GO:0042744
Gso18g0490 320 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 Pfam Peroxidase 45 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 SUPERFAMILY Heme-dependent peroxidases 28 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0490 320 PANTHER PEROXIDASE 20 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0490 Gso-Chr18 4927615 4930234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0490 23 320 Peroxidase AT5G05340 63.333 8.98e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0490 K00430 - gmx:100818176 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0490 18 4927615 4930234 Gso14g1701 14 49164392 49167544 PCT
Gso18g0490 18 4927615 4930234 Gso2g1986 2 44273525 44276651 PCT
Gso14g1701 14 49164392 49167544 Gso18g0490 18 4927615 4930234 PCT
Gso2g1986 2 44273525 44276651 Gso18g0490 18 4927615 4930234 PCT