Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0489 ATGGCTTCTCATCATCTCCAATATCTTGTGCTTGCCATAGCCACACTTCTCACAATCTCTTCACATGCACAACTCACTCCTGATTTTTACAACAATGTTTGCCCTCAGGCACTGCCTATCATTAAGTCAGTTGTTCAACGAGCAATATTTCGTGAACGGCGCATTGGAGCATCTTTACTTCGTTTGCACTTCCATGACTGTTTTGTCAATGGCTGTGATGGATCAATTCTGCTGGATGACACCCCCAACTTCACTGGGGAGAAGACTGCCCTTCCAAATATTAACTCAATAAGAGGTTTGGAGGTGGTTGATGAAATTAAAGCAGCCGTTGACAGAGCTTGCAAACGTCCCGTGGTATCATGTGCAGATATCTTAGCTGTAGCCGCTCGTGATTCTGTGTCCATATTGGGAGGCTCACTCTACTGGTACAAAGTGTTACTAGGCAGAAGGGATTCAAGAACTGCTAGCAAAGATGCTGCAAACTCAAATCTTCCACCCCCATTTTTCAGCCTCTCTCAGCTACTTTCAAGTTTTCAGTCTCACGGCTTAGACCTCAAAGATCTCGTGGCTCTCTCTGGTGCACACACCATTGGATTCGCGCAATGCGCCACCTTTAGGAACAGGATCTACAATGACACCAACATAGACCCCAACTTTGCATCTTCTCTGCAGGGTACGTGCCCTAGAAGTGGTGGAGACAGCAATCTAGCACCGTTGGATCGTTTCTCTCCCTCAAGAGTTGACACTTCGTACTATACCTCTTTGCTGAGTAAAAAGGGTCTCCTTCATTCTGATCAAGAGCTCTTCAAAGGAGATGGTGGTGAGAGTGACACTTTGGTGAAGCTCTACAGCAGGAACCCTTTTGCTTTTGCTAGAGATTTTAAGGCTTCCATGATCAAGATGGGTAACATGAAGCCTCTTATTGGGAATGCTGGAGAGATCAGAGTCAATTGTAGAAGTGTCAACTAA 969 0.4551 MASHHLQYLVLAIATLLTISSHAQLTPDFYNNVCPQALPIIKSVVQRAIFRERRIGASLLRLHFHDCFVNGCDGSILLDDTPNFTGEKTALPNINSIRGLEVVDEIKAAVDRACKRPVVSCADILAVAARDSVSILGGSLYWYKVLLGRRDSRTASKDAANSNLPPPFFSLSQLLSSFQSHGLDLKDLVALSGAHTIGFAQCATFRNRIYNDTNIDPNFASSLQGTCPRSGGDSNLAPLDRFSPSRVDTSYYTSLLSKKGLLHSDQELFKGDGGESDTLVKLYSRNPFAFARDFKASMIKMGNMKPLIGNAGEIRVNCRSVN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0489 322 PANTHER CATIONIC PEROXIDASE 6 321 - -
Gso18g0489 322 Gene3D - 28 319 - -
Gso18g0489 322 Pfam Peroxidase 42 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gso18g0489 322 SUPERFAMILY Heme-dependent peroxidases 24 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 CDD secretory_peroxidase 24 321 IPR033905 GO:0004601|GO:0042744
Gso18g0489 322 PANTHER PEROXIDASE 72-RELATED 6 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 Gene3D Peroxidase, domain 2 165 301 - -
Gso18g0489 322 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gso18g0489 322 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0489 322 ProSiteProfiles Plant heme peroxidase family profile. 24 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0489 Gso-Chr18 4917129 4919758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0489 22 322 Peroxidase AT5G05340 57.756 1.37e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0489 K00430 - gmx:100816580 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0489 18 4917129 4919758 Gso2g1987 2 44278287 44281419 PCT
Gso2g1987 2 44278287 44281419 Gso18g0489 18 4917129 4919758 PCT