Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0488 ATGGCTTCTAATATCCAAACTCTGCTTGTGCTTGTTCTGGCAACATTGGGAACATTTATGATCCCTTCCAATGCACAGCTTACTCCTAATTTCTATAAGAAAGTTTGTCCCCAGGCATTGCCAATCATAAGGTCTGTCGTTCACCGAGCAATTATTCGTGAACGACGCATTGGAGCCTCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAATGGTTGTGATGGATCAGTTCTACTGGATGACACGCACAACTTCACTGGCGAGAAAACAGCCCTACCTAATCTGAATTCAATAAGAGGTTTGGAAGTGGTTGATGAGATTAAGGCAGCGGTTGACAAAGCTTGCAACCGTCCTGCTGTATCATGTGCAGATATCTTAGCTATAGCTGCTCGTGATTCTGTGGCCATATTAGGGGGTCCACACCTATGGTACGGCGTATTACTAGGCAGAAGAGACGCGAGAACAGCAAGCAAGGATGCTGCAAACGCCAATCTCCCTCCTCCATTTTTCAACTTCTCACAGCTTCTCTCCAACTTCAACTCTCACGGATTAGACCTCAAAGATCTTGTGGCACTCTCTGGTGGCCACACCATAGGGTTTGCAAGGTGCACTACCTTCAGGGACCGCATCTACAACGACACCATGGCCAACATAAACCCTACTTTTGCAGCCTCTTTGAGGAAAACATGCCCTAGAGTTGGCGGTGACAACAACTTGGCACCGTTGGATCCAACTCCTGCAACGGTTGACACTTCATACTTCAAGGAATTGCTGTGCAAAAAGGGTCTCCTTCATTCGGATCAAGAACTCTACAAGGGAAATGGCAGTGAAAGTGACAAGTTGGTGGAGCTTTATAGCAGGAACCCTTTTGCATTTGCTAGAGATTTCAAGGCTTCTATGATCAAGATGGGTAACATGAAGCCTCTCACAGGGAACAAAGGAGAGATCAGACGCAACTGCAGAAGAGTTAATTAA 978 0.4611 MASNIQTLLVLVLATLGTFMIPSNAQLTPNFYKKVCPQALPIIRSVVHRAIIRERRIGASLLRLHFHDCFVNGCDGSVLLDDTHNFTGEKTALPNLNSIRGLEVVDEIKAAVDKACNRPAVSCADILAIAARDSVAILGGPHLWYGVLLGRRDARTASKDAANANLPPPFFNFSQLLSNFNSHGLDLKDLVALSGGHTIGFARCTTFRDRIYNDTMANINPTFAASLRKTCPRVGGDNNLAPLDPTPATVDTSYFKELLCKKGLLHSDQELYKGNGSESDKLVELYSRNPFAFARDFKASMIKMGNMKPLTGNKGEIRRNCRRVN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0488 325 CDD secretory_peroxidase 26 324 IPR033905 GO:0004601|GO:0042744
Gso18g0488 325 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gso18g0488 325 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PANTHER PEROXIDASE 72-RELATED 5 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Gso18g0488 325 Gene3D Peroxidase, domain 2 167 304 - -
Gso18g0488 325 ProSiteProfiles Plant heme peroxidase family profile. 26 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PANTHER CATIONIC PEROXIDASE 5 324 - -
Gso18g0488 325 SUPERFAMILY Heme-dependent peroxidases 26 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 Gene3D - 30 325 - -
Gso18g0488 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0488 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0488 Gso-Chr18 4909870 4913939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0488 25 325 Peroxidase AT5G05340 58.882 3.08e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0488 K00430 - gmx:100816056 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0488 18 4909870 4913939 Gso14g1702 14 49172789 49176673 PCT
Gso18g0488 18 4909870 4913939 Gso2g1988 2 44289060 44292462 PCT
Gso14g1702 14 49172789 49176673 Gso18g0488 18 4909870 4913939 PCT
Gso2g1988 2 44289060 44292462 Gso18g0488 18 4909870 4913939 PCT