Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0487 ATGGCACTTTCTCCTATTCGTTCTTCTTCTTTCTCTTCATCAGCTATTGTTGCATTGGCTGTGTTACTGCTTCTTTCAGGGACCTCTTCAGCTAACCTCTCAAAGAACTTCTATTCCAAGACATGTCCCAACGTTTTCAACACTGTAAAATCTGTAGTTAAATCTGCTGTTGTCAGAGAACCTCGCATTGGGGCATCTATTGTTCGTCTCTTCTTCCATGACTGCTTTGTTCAAGGCTGTGATGGGTCAATACTACTTGATGACACTCCAACCTTCCAGGGGGAGAAAACTGCAGCTGCTAACAACAATTCAGTGAGAGGCTTTGAAGTAATTGATGCTATCAAGTCTGAGGTCGAGAAAATATGCCCTGGTGTGGTCTCATGTGCTGATATCTTGGACATTGCTTCTCGTGACTCTGTTGTTCTTCTTGGAGGGCCATTTTGGAAAGTTAGACTTGGAAGAAGGGATTCCAGAACTGCCAACTTTACTGCTGCTAACACTGGTGTTATTCCACCTCCCACATCTAACCTCACCAACCTTATCACAAGGTTTCGAGATCAAGGACTCTCTGCTAGGGACATGGTTGCTTTATCTGGAGCTCACACATTTGGCAAAGCAAGGTGTACTAGTTTCAGAGATCGCATATACAATCAAACCAACATTGATAGAACATTTGCATTGGCCAGGCAGAGGAGGTGTCCTAGGACTAATGGCACAGGTGACAACAATCTAGCAAATCTAGACTTCAGAACTCCAAATCATTTTGACAACAACTACTTCAAAAACCTTCTCATCAAAAGGGGACTCCTGAATTCTGATCAAGTGCTTTTCAATGGTGGATCCACTGATTCACTGGTAAGAACTTACAGCCAGAATAACAAGGCATTTGATACTGACTTTGTTAAAGCAATGATTAGGATGGGAGATATCAAACCCTTAACTGGGTCACAAGGTGAGATTAGGAAGAACTGCAGGAGAGTGAATTAA 987 0.4265 MALSPIRSSSFSSSAIVALAVLLLLSGTSSANLSKNFYSKTCPNVFNTVKSVVKSAVVREPRIGASIVRLFFHDCFVQGCDGSILLDDTPTFQGEKTAAANNNSVRGFEVIDAIKSEVEKICPGVVSCADILDIASRDSVVLLGGPFWKVRLGRRDSRTANFTAANTGVIPPPTSNLTNLITRFRDQGLSARDMVALSGAHTFGKARCTSFRDRIYNQTNIDRTFALARQRRCPRTNGTGDNNLANLDFRTPNHFDNNYFKNLLIKRGLLNSDQVLFNGGSTDSLVRTYSQNNKAFDTDFVKAMIRMGDIKPLTGSQGEIRKNCRRVN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0487 328 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 Pfam Peroxidase 49 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 ProSiteProfiles Plant heme peroxidase family profile. 32 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 CDD secretory_peroxidase 32 327 IPR033905 GO:0004601|GO:0042744
Gso18g0487 328 PANTHER PEROXIDASE 13 327 - -
Gso18g0487 328 Gene3D Peroxidase, domain 2 171 307 - -
Gso18g0487 328 PANTHER PEROXIDASE 72-RELATED 13 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso18g0487 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Gso18g0487 328 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Gso18g0487 328 Gene3D - 36 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0487 Gso-Chr18 4890651 4894605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0487 16 328 Peroxidase AT5G58390 65.176 1.64e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0487 K00430 - gmx:100813384 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0487 18 4890651 4894605 Gso14g1704 14 49189772 49194957 PCT
Gso18g0487 18 4890651 4894605 Gso2g1990 2 44309729 44314148 PCT
Gso14g1704 14 49189772 49194957 Gso18g0487 18 4890651 4894605 PCT
Gso2g1990 2 44309729 44314148 Gso18g0487 18 4890651 4894605 PCT