Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0465 ATGGCCACACAGACGCAAGATCCACGTTCAAACCCTAACCCTAATCCCAATGCAATGTCGGCAACGCCATCTTCCTCCTTCTTCATCCCCGCCGCCGGCGGCAACGGTCCCTCCGCCGCTCCCGTCGCCGGCTCCGGCGAGTCGCACTCGCACCACCGGAGGGCGCACTCGGAGGTCAGCTTCCGGCTGCCGGATGACATGATTGACTTGTCGCCGTCGGATCCGTTCAACGGCGGATCCTCGACGGCGAGCTTCGAGGAGATCGGATCCGAGGACGACCTGTTCTCCACCTACATTGACGTCGAGAAGCTCGGGGCTGGCCGCGGCGGAAACGGATCGGATCAGAGCGGTTATGGAAATGGCGCCGGCAGCAGCTGCTACAACGACGGCGAGAAGAGTCCGAGCACCGCCGCTGCGCGGCCGAGACACCGGCACAGTAGCTCCGTCGACGGTTCCACGTCGACGAGCATGTTCGGAGAGATCATGGATGCGAAGAAAGCCATGCCTCCTGATAAGCTCGCAGAGCTTTGGAACATTGATCCAAAGCGTGCCAAAAGAATACTGGCTAATCGGCAATCTGCCGCACGTTCAAAAGAAAGAAAGGCACGCTATATACAAGAACTTGAGCGCAAAGTCCAGACCCTTCAGACTGAAGCAACAACACTTTCTGCCCAACTTACACTGTACCAGAGGGATACAACTGGTCTGAGTTCTGAAAATACCGAGCTTAAGCTCCGTCTACAAGCCATGGAGCAACAGGCACAGCTCCGTGATGTTCTTAATGATGCATTGATGAAGGAGGTTGAGAGGCTTAAGATTGCTACCGGAGAGGCATTGAACCAATCTGAGTCTTTTAACCTGGGAATGCACCAGATGCCATATGCAGGGTCAAATTTCTTTTCAATCCCACCACATTCAGGTCCTTCTGGGCACCAGAACATGCAATTGCCACCATTTGGCCACTCCCATTCCACTGTGCCGACTCATCAGCTGCAACAAACAAATTCTCACCAAATGTCAGATATATTGCAAAACGACCAGCTTGGTCGTCTGCAGGGACTTGACATTAGCAGCAAAGGAACACCCGTGGTGAAGTCTGAAGGCCCCTCAATATCTGCAAATGAGAGTAGCACAACATTTTGA 1143 0.5407 MATQTQDPRSNPNPNPNAMSATPSSSFFIPAAGGNGPSAAPVAGSGESHSHHRRAHSEVSFRLPDDMIDLSPSDPFNGGSSTASFEEIGSEDDLFSTYIDVEKLGAGRGGNGSDQSGYGNGAGSSCYNDGEKSPSTAAARPRHRHSSSVDGSTSTSMFGEIMDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDVLNDALMKEVERLKIATGEALNQSESFNLGMHQMPYAGSNFFSIPPHSGPSGHQNMQLPPFGHSHSTVPTHQLQQTNSHQMSDILQNDQLGRLQGLDISSKGTPVVKSEGPSISANESSTTF* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0465 380 MobiDBLite consensus disorder prediction 363 380 - -
Gso18g0465 380 MobiDBLite consensus disorder prediction 113 132 - -
Gso18g0465 380 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 377 - -
Gso18g0465 380 PANTHER BZIP TRANSCRIPTION FACTOR 1 377 - -
Gso18g0465 380 SMART brlzneu 178 242 IPR004827 GO:0003700|GO:0006355
Gso18g0465 380 MobiDBLite consensus disorder prediction 47 63 - -
Gso18g0465 380 SUPERFAMILY Leucine zipper domain 182 233 IPR046347 GO:0003700|GO:0006355
Gso18g0465 380 MobiDBLite consensus disorder prediction 106 156 - -
Gso18g0465 380 Coils Coil 198 225 - -
Gso18g0465 380 MobiDBLite consensus disorder prediction 302 337 - -
Gso18g0465 380 Pfam bZIP transcription factor 182 240 IPR004827 GO:0003700|GO:0006355
Gso18g0465 380 CDD bZIP_plant_RF2 183 232 IPR044759 GO:0003700|GO:0006355
Gso18g0465 380 MobiDBLite consensus disorder prediction 1 31 - -
Gso18g0465 380 MobiDBLite consensus disorder prediction 1 85 - -
Gso18g0465 380 MobiDBLite consensus disorder prediction 358 380 - -
Gso18g0465 380 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 243 IPR004827 GO:0003700|GO:0006355
Gso18g0465 380 Gene3D - 181 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0465 Gso-Chr18 4609535 4612865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0465 6 380 bZIP Transcription Factor Family AT2G40620 49.169 1.76e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso18g0465 bZIP_1 4.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0465 - - gmx:100790732 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0465 18 4609535 4612865 Gso14g1722 14 49372764 49375891 PCT
Gso18g0465 18 4609535 4612865 Gso2g2007 2 44528458 44531400 PCT
Gso14g1722 14 49372764 49375891 Gso18g0465 18 4609535 4612865 PCT
Gso2g2007 2 44528458 44531400 Gso18g0465 18 4609535 4612865 PCT