Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0464 ATGGTTTATGGGATACTATTCTTTGTCCTATTTGCATTCACTTTGAGTTTAGCTTTTCTACTCTCAAAGTGTCTATCAAAAAGTCAAACAAAAAATGTTCCAAAAGGGTCTCTGGGGTACCCTATCATCGGAGAGACACTTAGTTTTCTCAAAGCACAGAGACAAGATAAGGGTTCTGTTTGGTTGGAAGAACGGATATCTAAGTATGGCCCTATCTTCAAAACCTCCTTAATGGGGTTCCCTACAGTCTTTGTAATTGGACAAGAAGGAAACAAGTTTGTCCTTGGTTCACCAGATGATTTGCTTTCTTCTAAGAAACCCCTCACCCTGCGAAAGATACTTGGAAGGCAAAGCTTAGTTGAACTTACAGGACCAAGATACAGGTTAGTCAAAGGGGAAATGTTGAAATTCTTGAAACCTGAATGCCTTCAGAACTATGTCAAAGAGATGGATGAATTGGTGAATGCTACATTACTGAGAGAATTCAGAGAGAATGAAATCATTGGAGCTGTGGTCTTCATGAAGAAACTGTCCTATGAGATAGCATGCAATCTATTGTTTGACATTAAGGATGAGCACACTAAGGAGGCTTTGTTTGTAGATTTTACTTTGGCATTTAAAGCAATTCATTCTCTTCCCATCAATCTCCCTGGCACCACATTTTGGAGAGGCCAAAGAGCCAGGGCAAGAATTGTAGACAGGATGATTCCTATTTTGAACAAAAGAAGGGAGGAACTGTCAAAAGGAGTTCTAAGCTCCACAAATGACATGCTTTCTTGCCTGCTTGCACTAAGGGATGAAAATCATCAACCTCTAGATGATGATTTAATCACTGATAATTTTATTTTTTTATTTGTTGCTAGTCATGACACATCTGCCACTCTTATGAGCTTGATGATATGGAAGTTATCTAGAGATCAAGAGGTTTACAACAAAGTTTTAGAAGAACAAATGGAAATTATAAAGCAGAGGGAAGGAACAGAAGAGAGGCTAACATGGGCAGAGATACAAAAGATGAAATACACATGGAGAGTTGCTCAGGAATTGATGAGGATGATCCCTCCTTTGTTTGGCAGCTTTAGGAAAGCACTTAAAGACACTAACTACAAAGGCTATGACATACCAAAAGGGTGGCAGGTGTATTGGGCAGCATATGGAACGCATATGAACGATGATATATTCGAGAATCCACACAAGTTTGATCCATCTCGTTTTGAGAATCCAACCAAGCCAATTCCACCTTATTCTTACCTCCCATTTGGTGCAGGGCTTCATTATTGCATAGGAAACGAGTTTGCCAGGATTGAGACCTTGGCTATTATTCACAACTTTGTAAAGATGTATGAATGGTCTCAAGTAAACCCAGAGGAAGCAATCACTCGTCAACCAATGCCATATCCATCCATGGGTCTCCCAATTAAGATCAAACCCAGATCTTGTAGTATTTCTTAA 1452 0.3946 MVYGILFFVLFAFTLSLAFLLSKCLSKSQTKNVPKGSLGYPIIGETLSFLKAQRQDKGSVWLEERISKYGPIFKTSLMGFPTVFVIGQEGNKFVLGSPDDLLSSKKPLTLRKILGRQSLVELTGPRYRLVKGEMLKFLKPECLQNYVKEMDELVNATLLREFRENEIIGAVVFMKKLSYEIACNLLFDIKDEHTKEALFVDFTLAFKAIHSLPINLPGTTFWRGQRARARIVDRMIPILNKRREELSKGVLSSTNDMLSCLLALRDENHQPLDDDLITDNFIFLFVASHDTSATLMSLMIWKLSRDQEVYNKVLEEQMEIIKQREGTEERLTWAEIQKMKYTWRVAQELMRMIPPLFGSFRKALKDTNYKGYDIPKGWQVYWAAYGTHMNDDIFENPHKFDPSRFENPTKPIPPYSYLPFGAGLHYCIGNEFARIETLAIIHNFVKMYEWSQVNPEEAITRQPMPYPSMGLPIKIKPRSCSIS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0464 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Gso18g0464 483 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 PRINTS E-class P450 group IV signature 411 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 PANTHER CYTOCHROME P450 26 6 476 - -
Gso18g0464 483 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 476 - -
Gso18g0464 483 Pfam Cytochrome P450 34 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 Gene3D Cytochrome P450 23 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0464 483 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0464 Gso-Chr18 4590215 4593077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0464 1 453 Cytochrome P450 AT4G19230 34.279 4.88e-77 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0464 - - gmx:100790209 961.829