Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0460 ATGGCAGAAGCCAATGTAGTGCTGTTGGATTTCTGGCCAAGCTCTTATGGAATGAGAGTGAAAATCGCTTTGGCAGAGAAGGGTATCTCATATGAGTGCAAACAAGAAGACTTGGAAGCTAAAAGTTCTCTGATTTTAGAGATGAACCCGGTTCACAAAATGATACCAGTTTTGATTCATAATGGAAAATCCATTTGTGAATCACTCAACATTGTTCAGTACATTGATGAGGCATGGAACCTCAAACCTTCTCTACTTCCATCTGACCTTTACAAACGATCCCAAGCCAGGTTTTGGGGCGATTACACTGACAAAAATGTATACAATGCTGTGAAGAAGGTATGGACAGGGAAGGGTAAAAAACAAGAAGAGTTCAAGAAACAATTTATACGATGCTTGAAGACCATGGAAGATGAACTTGGAGACAAGCCATATTTTGGTGGTGAGGACTTTGGGTATGTGGATGTGGCTCTTGTTCCCTTCACTAGCTGGTTTTACACGGTTGAGACCTGCGGGAAACTAAGCATAGAGGAAGAGTGTCCCAAACTTCTGGCTTGGCCAAGAGGTGCATGGAAAAAGAGTGTGGCCAAGTCACTCCCTCACCCACACCAGATCTATGCCTTTGCCATGCAGTATAAACAGAGACATGGACTTGAGTAG 660 0.4318 MAEANVVLLDFWPSSYGMRVKIALAEKGISYECKQEDLEAKSSLILEMNPVHKMIPVLIHNGKSICESLNIVQYIDEAWNLKPSLLPSDLYKRSQARFWGDYTDKNVYNAVKKVWTGKGKKQEEFKKQFIRCLKTMEDELGDKPYFGGEDFGYVDVALVPFTSWFYTVETCGKLSIEEECPKLLAWPRGAWKKSVAKSLPHPHQIYAFAMQYKQRHGLE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0460 219 CDD GST_C_Tau 91 212 IPR045074 GO:0004364|GO:0006749
Gso18g0460 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 215 - -
Gso18g0460 219 SUPERFAMILY Thioredoxin-like 5 83 IPR036249 -
Gso18g0460 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 208 IPR010987 -
Gso18g0460 219 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Gso18g0460 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 215 IPR045073 -
Gso18g0460 219 Gene3D Glutaredoxin 1 88 - -
Gso18g0460 219 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Gso18g0460 219 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Gso18g0460 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Gso18g0460 219 CDD GST_N_Tau 6 79 - -
Gso18g0460 219 SFLD Main (cytGST) 2 216 - -
Gso18g0460 219 Gene3D - 89 219 - -
Gso18g0460 219 Pfam Glutathione S-transferase, C-terminal domain 123 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0460 Gso-Chr18 4537225 4538545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0460 6 215 Glutathione S-transferase Gene Family AT1G78380 56.398 7.14e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0460 K00799 - gmx:100527221 397.127