Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0453 ATGCTTCTAAACCTCTCCCATGCTTCCTTTCAGCAGGAAAGTATGACAGCCCACAAAGTTTACTCCAAATTTAACTGTCAATATCTTATTCCTTTCAGCAAACAACTCTCCATGAAGTTCCATTCTACTTCAGTGGCATCTTTTCTTTTTGTCATAGTTATTCTCTTTCCTCTGGCTATTGCTGATCTAAGTTCTGATAAGCAAGCCCTTCTTGATTTTGCTAATGCCGTCCCGCATCGTCGAAACCTGATGTGGAATCCATCAACCTCAGTCTGTACATCTTGGGTAGGCATCACTTGCAATGAAAATAGAACTCGTGTTGTTAAAGTCCGGCTCCCTGGAGTTGGACTAGTTGGCACCATCCCATCCAATACACTTGGCAAGCTTGGTGCTGTGAAAATTATTAGCCTTCGCTCCAACCTACTCAGTGGAAATCTTCCTGCTGACATTGGTTCTCTTCCTTCTCTTCAGTATCTCTACCTCCAACATAATAACCTTTCTGGTGATATACCTGCCTCATTGTCTCTCCAACTCGTTGTACTCGATTTGTCATATAATTCCTTCACCGGTGTTATTCCGACGACATTTCAAAATTTGTCGGAATTAACTAGTTTGAATCTCCAGAACAACTCGCTATCCGGACAGATACCTAATCTCAATGTCAATCTGCTCAAGCTTTTGAATTTAAGCTACAACCAATTGAATGGCTCAATTCCTAAAGCTCTTCAGATTTTTCCAAATTCTTCCTTTGAAGGAAACTCTCTCTTATGTGGACCACCTCTAAAGCCATGCTCTGTGGTTCCCCCTACACCTTCTCCTTCCTCGACTCCACCTCAATCAACTCCTGGAAGACAAAGCTCAAAAAACAAGTTGAGTAAAATAGCTATCATTGCTATTGCTGTTGGAGGAGCTGTGGTGCTATTCTTTGTTGCTCTTGTTTTCTTTATTTGCTGTTTAAAGAAGGAAGATGACAGAGGCTCCAATGTAATTAAAGGGAAGGGTCCTAGTGGTGGTAGGGGTGAGAAACCAAAAGAAGAGTTTGGAAGTGGGGTTCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGAAGTTCTTATAATTTTGATCTTGAGGATTTGCTGCGAGCTTCGGCTGAAGTTCTGGGGAAGGGTAGTTATGGTACTGCATATAAGGCCATACTGGAGGAGTCAATGACAGTTGTGGTGAAAAGATTGAAAGAAGTTGTTGTAGGCAAGAAGGACTTTGAACAGCAGATGGAGATTATGGGAAGAGTTGGACAGCACACAAATGTTGTGCCGCTTCGTGCTTATTATTATTCAAAAGATGAAAAACTTTTGGTATATGACTATGTCCCTGGTGGCAACCTACACACACTCTTGCACGGTGGTAGGACAGGTGGAAGAACTCCATTAGACTGGGACTCTCGAATAAAAATATCCCTTGGAACAGCCAAAGGACTTGCCCACGTTCATTCTGTTGGTGGTCCCAAATTTACACATGGAAATATTAAGTCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCCTTGCTCCCCTTATGAATGTTCCTGCTACCCCTTCTAGAACTGCAGGTTATCGTGCTCCTGAGGTGATTGAAGCCCGTAAACACTCTCATAAATCCGATGTGTATAGCTTTGGTGTCCTCCTTCTTGAGATGCTTACCGGGAAGGCTCCTCTCCAATCTCCGGGACGTGATGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTAGGGAAGAGTGGACGGCCGAAGTTTTTGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTTCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGATGCCAGATATGAGACCTAGCATGGATGAAGTAGTGAGAATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGGCCATCTTCTGAAGAAAATAAATCTAAGGACTCAAATGTTTAA 2007 0.4285 MLLNLSHASFQQESMTAHKVYSKFNCQYLIPFSKQLSMKFHSTSVASFLFVIVILFPLAIADLSSDKQALLDFANAVPHRRNLMWNPSTSVCTSWVGITCNENRTRVVKVRLPGVGLVGTIPSNTLGKLGAVKIISLRSNLLSGNLPADIGSLPSLQYLYLQHNNLSGDIPASLSLQLVVLDLSYNSFTGVIPTTFQNLSELTSLNLQNNSLSGQIPNLNVNLLKLLNLSYNQLNGSIPKALQIFPNSSFEGNSLLCGPPLKPCSVVPPTPSPSSTPPQSTPGRQSSKNKLSKIAIIAIAVGGAVVLFFVALVFFICCLKKEDDRGSNVIKGKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKKDFEQQMEIMGRVGQHTNVVPLRAYYYSKDEKLLVYDYVPGGNLHTLLHGGRTGGRTPLDWDSRIKISLGTAKGLAHVHSVGGPKFTHGNIKSSNVLLNQDNDGCISDFGLAPLMNVPATPSRTAGYRAPEVIEARKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEVVRMIEEIRQSDSENRPSSEENKSKDSNV* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0453 668 Gene3D Ribonuclease Inhibitor 65 177 IPR032675 -
Gso18g0453 668 MobiDBLite consensus disorder prediction 328 351 - -
Gso18g0453 668 Pfam Leucine Rich Repeat 155 174 IPR001611 GO:0005515
Gso18g0453 668 Pfam Leucine rich repeat 177 234 IPR001611 GO:0005515
Gso18g0453 668 PANTHER LRR RECEPTOR-LIKE KINASE 26 668 - -
Gso18g0453 668 CDD STKc_IRAK 382 647 - -
Gso18g0453 668 Gene3D Phosphorylase Kinase; domain 1 344 451 - -
Gso18g0453 668 ProSiteProfiles Protein kinase domain profile. 376 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0453 668 MobiDBLite consensus disorder prediction 266 286 - -
Gso18g0453 668 PANTHER OS05G0588300 PROTEIN 26 668 - -
Gso18g0453 668 Pfam Protein kinase domain 379 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0453 668 Gene3D Ribonuclease Inhibitor 178 265 IPR032675 -
Gso18g0453 668 ProSiteProfiles Leucine-rich repeat profile. 155 177 IPR001611 GO:0005515
Gso18g0453 668 Pfam Leucine rich repeat N-terminal domain 64 101 IPR013210 -
Gso18g0453 668 MobiDBLite consensus disorder prediction 646 668 - -
Gso18g0453 668 Gene3D Transferase(Phosphotransferase) domain 1 452 667 - -
Gso18g0453 668 ProSiteProfiles Leucine-rich repeat profile. 201 223 IPR001611 GO:0005515
Gso18g0453 668 ProSitePatterns Protein kinases ATP-binding region signature. 382 413 IPR017441 GO:0005524
Gso18g0453 668 MobiDBLite consensus disorder prediction 337 351 - -
Gso18g0453 668 SUPERFAMILY L domain-like 65 264 - -
Gso18g0453 668 SUPERFAMILY Protein kinase-like (PK-like) 380 645 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0453 Gso-Chr18 4484570 4489301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0453 23 668 Receptor kinase-like Gene Family AT5G58300 66.514 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso18g0453 Pkinase 9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0453 - - gmx:100786831 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0453 18 4484570 4489301 Gso14g1737 14 49603555 49609225 PCT
Gso18g0453 18 4484570 4489301 Gso2g2016 2 44661826 44667726 PCT
Gso14g1737 14 49603555 49609225 Gso18g0453 18 4484570 4489301 PCT
Gso2g2016 2 44661826 44667726 Gso18g0453 18 4484570 4489301 PCT