Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0415 ATGAACAATGGGAAAGTTGTTGCAGTTAAAAAATTAAAATCAGGAAATTCTAGCAAGATAGATGACGAATTTGAAACTGAAGTAACACTTATAAGTAATGTTCATCATAGAAATCTTCTTCGGCTTCTTGGTTGCTGCAGCAAAGGCCAAGAGAGAATCCTTGTTTACGAATACATGGCGAACGCCAGCCTAGACAAATTCTTATTTGGAAAAAGAAAAGGTTCCCTCAACTGGAAACAATGCTATGATATAATTTTGGGCACAGCAAGGGGATTGACTTATCTACATGAGGAATTTCATGTGTCTATCATACACAGAGATATTAAGAGTAGCAATATCCTCTTGGATGAACAACTTCAGCCAAAAATTTCGGACTTTGGGTTGGCGAAACTCCTACCCGGGGACCAATCTCATCTTCGCACAAGAGTTGCAGGAACAATGGGATACACAGCACCTGAGTATGTACTCCATGGTCAATTATCAGCAAAGGTTGATATATACAGCTATGGAATTGTAGTTTTAGAAATCATAAGTGGTCAAAAGAGTACTGATATGAAAGCTGTTGATGATGATGGTGATGAAGACTATCTTCTTCGACGAGCATGGAAGTTGTATGAGAGAGGCATGCTTTTGGAATTAGTGGACCAAAGCTTAGACCCTAATAACTATGATGCAGAAGAGGTGAAGAAAGTCATAGGCATTGCTTTGTTGTGCACTCAAGCATCGGCTGCAATGAGGCCAGCCATGTCTGAAGTAGTAGTCCTACTCAGTAGCAATGACTTACTTGAGCATATGAGACCTTTGATGCCCATCTTTATTTGA 822 0.3966 MNNGKVVAVKKLKSGNSSKIDDEFETEVTLISNVHHRNLLRLLGCCSKGQERILVYEYMANASLDKFLFGKRKGSLNWKQCYDIILGTARGLTYLHEEFHVSIIHRDIKSSNILLDEQLQPKISDFGLAKLLPGDQSHLRTRVAGTMGYTAPEYVLHGQLSAKVDIYSYGIVVLEIISGQKSTDMKAVDDDGDEDYLLRRAWKLYERGMLLELVDQSLDPNNYDAEEVKKVIGIALLCTQASAAMRPAMSEVVVLLSSNDLLEHMRPLMPIFI* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0415 273 Pfam Protein kinase domain 2 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0415 273 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 2 264 - -
Gso18g0415 273 Gene3D Transferase(Phosphotransferase) domain 1 60 265 - -
Gso18g0415 273 SUPERFAMILY Protein kinase-like (PK-like) 3 256 IPR011009 -
Gso18g0415 273 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0415 273 CDD STKc_IRAK 1 253 - -
Gso18g0415 273 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 264 - -
Gso18g0415 273 Gene3D Phosphorylase Kinase; domain 1 1 59 - -
Gso18g0415 273 SMART serkin_6 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0415 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 103 115 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0415 Gso-Chr18 4131150 4132354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0415 1 259 Receptor kinase-like Gene Family AT1G56120 52.510 2.66e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso18g0415 Pkinase 4.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0415 - - gsj:114396243 542.347