Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso18g0411 | ATGCCTCGCAGCAGCATACTTTGTGGAAATCATACAGCAGATGAAAGCACAACTTTCAGTGAAGCTGGACAGCAAGTGTTGATGGATCTACAGATAGCAACACCAAAAATTACTGGCTTCTATGCAGCTACCAAGACACAAGTGGCTGGTGGTGCAATCTATGCCATTGCACAATGTGCAGAAACTCTCACACAAGATAGTTGTTTGGATTGCTTGTCAGTTGAACATAGCAGCATACAAGGTTGTCTTCCCAAAACAAATGGTAGGGCATTCGATGCTGGGTGCTTTATGAGATACTCGGAGACACCCTTCTTTGCTGATAACCAAACCATTGATATCAACCCCTTCTTAAAACAAGGAGGAAGTCCAAGCAAGAAGTGGGCAATTTTTGGTGGTGGTGTTGGAGGTGCAGTCCTTGTTGTGACCCTTCTTTCATTATTTCTCCGGTGGCGTAGAAGATCCCAAAGTCCCAAGAGAGCTCCTAGAGGTAACATATTGGGAGCAACTGAGTTGAAAGCTGCAACCAAGTACAAGTATAGTGACTTGAAAGTTGCAACAAAAATTTTTAGTGAGAAAAATAAGCTAGGAGAAGGAGGCTTTGGCGCTGTATACAAGGGGACAATGAAAAATGGGAAAGTTGTTGCAGTCAAAAAGTTAATTTCAGGAAAATCCAACAAGATAGATGACGATTTTGAAAGTGAAGTAATGCTTATAAGTAATGTTCACCACAGAAATCTGGTTCAACTTCTTGGTTGTTGTAGTAAAGGCCAAGACAGAATTCTTGTTTACGAATACATGGCAAACAACAGCCTTGACAAATTCTTATTTGGTAAAAGAAAAGGTTCACTCAACTGGAGACAACGCTTAGATATAATTTTGGGCACAGCAAGGGGATTGGCCTATCTACATGAGGAATTTCATGTGTCTATCATACATAGAGATATTAAGAGTGGGAATATCCTCTTGGATGAACAACTTCAGCCTAAAATTTCTGATTTTGGGTTGGTGAAGCTCCTTCCAGGGGACCAATCTCATCTTAGCACAAGATTTGCAGGGACAATGGGATACACAGCACCTGAGTATGCACTTCACGGTCAATTATCAGAAAAGGCTGATACATACAGCTATGGAATTGTAGTGCTAGAAATCATTAGTGGTCAAAAGAATATTGATGTGAAGGTTGTTGATGATGATGATGGTGAGGATGAATACCTTCTTCGACAAGCATGGAAGTTGTATGAGAGAGGCATGCACTTGGATTTAGTGGACAAAAGCTTAGACCCTAATAACTATGATGCAGAAGAAGTGAAGAAAGTTATAGACATTGCTTTGTTGTGCACTCAAGCATCGGCTGCAATGAGGCCAACCATGTCTAAAGTAGTAGTTCTACTTAGTAGCAATTACTTTGTTGAGCATATGAAACCTTCAATGCCTATCTTTATTGAGTCGAATTTGAGGTCCCATAGAGATATCTCTGCTTGA | 1482 | 0.4062 | MPRSSILCGNHTADESTTFSEAGQQVLMDLQIATPKITGFYAATKTQVAGGAIYAIAQCAETLTQDSCLDCLSVEHSSIQGCLPKTNGRAFDAGCFMRYSETPFFADNQTIDINPFLKQGGSPSKKWAIFGGGVGGAVLVVTLLSLFLRWRRRSQSPKRAPRGNILGATELKAATKYKYSDLKVATKIFSEKNKLGEGGFGAVYKGTMKNGKVVAVKKLISGKSNKIDDDFESEVMLISNVHHRNLVQLLGCCSKGQDRILVYEYMANNSLDKFLFGKRKGSLNWRQRLDIILGTARGLAYLHEEFHVSIIHRDIKSGNILLDEQLQPKISDFGLVKLLPGDQSHLSTRFAGTMGYTAPEYALHGQLSEKADTYSYGIVVLEIISGQKNIDVKVVDDDDGEDEYLLRQAWKLYERGMHLDLVDKSLDPNNYDAEEVKKVIDIALLCTQASAAMRPTMSKVVVLLSSNYFVEHMKPSMPIFIESNLRSHRDISA* | 494 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso18g0411 | 493 | CDD | STKc_IRAK | 195 | 461 | - | - | |
Gso18g0411 | 493 | SMART | serkin_6 | 189 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso18g0411 | 493 | Gene3D | Transferase(Phosphotransferase) domain 1 | 266 | 474 | - | - | |
Gso18g0411 | 493 | Pfam | Salt stress response/antifungal | 12 | 101 | IPR002902 | - | |
Gso18g0411 | 493 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 5 | 477 | - | - | |
Gso18g0411 | 493 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 310 | 322 | IPR008271 | GO:0004672|GO:0006468 | |
Gso18g0411 | 493 | ProSiteProfiles | Gnk2-homologous domain profile. | 1 | 104 | IPR002902 | - | |
Gso18g0411 | 493 | Gene3D | Phosphorylase Kinase; domain 1 | 165 | 265 | - | - | |
Gso18g0411 | 493 | ProSiteProfiles | Protein kinase domain profile. | 189 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso18g0411 | 493 | Pfam | Protein tyrosine and serine/threonine kinase | 192 | 462 | IPR001245 | GO:0004672|GO:0006468 | |
Gso18g0411 | 493 | Gene3D | - | 4 | 104 | IPR038408 | - | |
Gso18g0411 | 493 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 5 | 477 | - | - | |
Gso18g0411 | 493 | SUPERFAMILY | Protein kinase-like (PK-like) | 175 | 478 | IPR011009 | - | |
Gso18g0411 | 493 | ProSitePatterns | Protein kinases ATP-binding region signature. | 195 | 218 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso18g0411 | Gso-Chr18 | 4067992 | 4070808 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso18g0411 | 2 | 490 | Receptor kinase-like Gene Family | AT1G70520 | 40.040 | 4.38e-109 | 336 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Gso18g0411 | PK_Tyr_Ser-Thr | 2.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso18g0411 | - | - | gmx:100776342 | 935.25 |