Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0385 ATGGTGGTGAAGGTCTATGGTCCTGCAAGTGCAGCCTGCCCTCAAAGGGTGTTGGTTTGCCTCTTAGAGAAAGGGGTAGAGTTTGAACTTGTGCATGTTGATCTTGATCAAGGAGAGCATAAGAAACCTGAATTTCTTCTCAGACAGCCCTTTGGTCAAGTTCCAGCTGTAGAGGATGGTGATTGCAGGCTCTTTGAATCCAGGGCTATTATAAGGTATTTTGCATCAAAATATGCTGACCGTGGCCCTGACCTATTGGGTAAAACCTTAGAGGAGAGGGCACTGGTGGAGCAGTGGCTTGAAGTAGAGGCAAGCAACTTCAACAATTTGTGCTTCAATATCATGTTTCAGCTGGTGATCCTACCAAAGATGGGTAAGCCTGGGGACTTGGCCTTGGCTCACAAATGTGAGCAAGATATAGAAAAGGTGCTTGATGTGTATGAAACTAGGCTCTCTCAAAGCACATATCTTGCTGGAGATAATTTCACTTTGGCTGATCTTAGCCACCTTCCAGGGCTTGAACATCTCATTGAGGAAGCTAAATTGGGACACTTGGTCACTGAGAGGAAGAATGTGAATGCTTGGTGGGAGAAAATTTCAAGTAGACCAGCTTGGAAGAAGTTAAAGGATTTGATTCACTAA 642 0.447 MVVKVYGPASAACPQRVLVCLLEKGVEFELVHVDLDQGEHKKPEFLLRQPFGQVPAVEDGDCRLFESRAIIRYFASKYADRGPDLLGKTLEERALVEQWLEVEASNFNNLCFNIMFQLVILPKMGKPGDLALAHKCEQDIEKVLDVYETRLSQSTYLAGDNFTLADLSHLPGLEHLIEEAKLGHLVTERKNVNAWWEKISSRPAWKKLKDLIH* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0385 213 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Gso18g0385 213 SFLD Main (cytGST) 4 202 - -
Gso18g0385 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Gso18g0385 213 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Gso18g0385 213 Gene3D - 87 208 - -
Gso18g0385 213 SUPERFAMILY GST C-terminal domain-like 81 208 IPR036282 -
Gso18g0385 213 PANTHER GLUTATHIONE S-TRANSFERASE F12 2 212 - -
Gso18g0385 213 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Gso18g0385 213 Pfam Glutathione S-transferase, C-terminal domain 115 203 IPR004046 -
Gso18g0385 213 CDD GST_C_Phi 91 209 IPR034347 -
Gso18g0385 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Gso18g0385 213 Gene3D Glutaredoxin 1 86 - -
Gso18g0385 213 CDD GST_N_Phi 2 77 - -
Gso18g0385 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0385 Gso-Chr18 3804163 3805903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0385 1 211 Glutathione S-transferase Gene Family AT3G03190 60.664 1.67e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0385 K00799 - gmx:100812502 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0385 18 3804163 3805903 Gso3g1945 3 45014346 45017525 GST
Gso18g0385 18 3804163 3805903 Gso10g1325 10 39566403 39569729 PCT
Gso10g1325 10 39566403 39569729 Gso18g0385 18 3804163 3805903 PCT