Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0383 ATGAACATCCATCTCCATTTCCCAATGTCACCACTTCAAACATCCTTCTTCGTCTTCTTCCTATGTTTTCTCAATGCCTCTTCTTCTATTTTCGCCACCACCCAATTTGACTTTGGGACTTTAACTATGAGCACTTTGAAGCTTCTCGGCGATGCCCATTTGAACAACAACACCGTCAGCCTCACCGGCGACCCCGCCGTCCCCAACTCCGCCGCCGGAAGAGCCCTTTACTCCGCCCCTGTCAGATTCCGGCAACCGGGAACCCCTTCTCCGGCGAGCTTCTCCACCTTCTTCTCCTTCTCCGTCACCAACCTCAACCCCTCCTCCGTCGGCGGCGGCCTCGCCTTCGTTATCTCGCCGGACTCCTCCGCCGTCGGCGACCCCGGCGGCTTCCTCGGCCTCCAAACCGCCGGCGGCGGAAACTTCCTCGCCGTGGAATTCGACACCCTGATGGACGTGGAGTTCAGCGACATCAATGGAAACCACGTCGGATTAGACCTAAATAGCGTCGTTTCGACGCAAGTTAGCGACTTGGGAGGCATCGGAGTGGATCTCAAAAGCGGTGACTCGGTGAACGCGTGGATCGAGTACGACGGAAACGCCAAAGGGTTGCGCGTTTGGGTCTCGTACTCGAACGTTCGGCCAAAAGATCCGATTTTGAAGGTGGATCTCGATGTGGGTATGTACGTTAACGATTTCATGTATGTGGGGTTTTCTGGGTCTACCCAAGGTAGCACCGAGGTTCACAGTGTTGAGTGGTGGAGTTTTAACTCCTCCTTTGATTCCGCGGCGGCTCCTGCCGCCTCGTCAGCACCCTCCGCCACGTCAGAGCAAAAGGAGAGTAGGTCGTCTAGGAAGAGTACTGTGGGGGCAGTTGCTGGGGTTGTCACTGCTGGTGCTTTTGTTCTTGCTCTCTTTGCTGGTGCATTGATTTGGGTGTATTCTAAGAAGGTTAAGTATGTGAAGAAGCTCGATCATTCTATTGAGTCGGAGATTATTAGAATGCCTAAGGAGTTTAGCTACAAGGAGCTTAAATTGGCCACTAAGGGGTTCAGTGCTAATAGGGTCATTGGTCATGGTGCTTTTGGGACTGTGTACAAGGGTGTGTTGCCTGAGAGTGGTGACATTGTTGCGGTGAAGAGGTGTAACCATAGTGGCCAGGGGAAGAATGAGTTTCTGTCTGAGTTGTCTATAATTGGAAGTCTTAGGCATAGGAATTTGGTTCACCTTCAAGGTTGGTGCCATGAGAAAGGTGAGATTTTGTTGGTGTATGACTTGATGCCAAATGGGAGTCTGGATAAGGCTTTGCATGAGTCTAGAATGCCGTTGTCTTGGCCTCACAGGCTCAAAATTTTGTTAGGTGTGTCGTCTGTTTTGGCCTACTTGCATCATGAGTGCGAAAACCAGGTAATTCATAGGGACATTAAGACTAGTAACATTATGTTAGATGAAGGGTTCATTGCTAGGTTAGGCGATTTTGGTTTAGCGAGGCAAACGGAGCATGACAAGTCTCCTGATGCCACTGTGGCTGCCGGGACAATGGGGTACCTTGCACCTGAGTACGTGCTTACTGGTAGAGCCACGGAGAAAACTGATGTGTTTAGCTATGGTGCTGTGGTTCTTGAGGTGGCCAGTGGGAGGAGGCCTATTGAGAAAGATGCTCCTGCTGCTGGGAATGGTAAAGTTGGAATTAGCAGCAATTTGGTGGAATGGGTTTGGAGTTTGCATCAAGAAGGTAAGTTGCTAACAGCGGCTGATCCGAGACTTGAAGGTGAGTTTGAGGAAGGGGAGATGAGGAAGGTACTCTTGGTTGGATTAGCTTGCTCACACCCTGATTCAATGGCAAGACCTACTATGAGGGGTGTGGTTCAGATGCTGCTGGGTGAGGCTGAAGTGCCTATTGTCCCTAGAGCCAAGCCATCTACTAGTTACAGTACTTCTCAACTCTTAATGAACTTGCAAGATAGTGAATCTGAGTGTAATAATGGTATGATCACCATCTCTACCTCTTCATCAGAGAGCAGCTTCAATGGCAGAGATAGTCTGATGGAAGTCTAG 2058 0.5019 MNIHLHFPMSPLQTSFFVFFLCFLNASSSIFATTQFDFGTLTMSTLKLLGDAHLNNNTVSLTGDPAVPNSAAGRALYSAPVRFRQPGTPSPASFSTFFSFSVTNLNPSSVGGGLAFVISPDSSAVGDPGGFLGLQTAGGGNFLAVEFDTLMDVEFSDINGNHVGLDLNSVVSTQVSDLGGIGVDLKSGDSVNAWIEYDGNAKGLRVWVSYSNVRPKDPILKVDLDVGMYVNDFMYVGFSGSTQGSTEVHSVEWWSFNSSFDSAAAPAASSAPSATSEQKESRSSRKSTVGAVAGVVTAGAFVLALFAGALIWVYSKKVKYVKKLDHSIESEIIRMPKEFSYKELKLATKGFSANRVIGHGAFGTVYKGVLPESGDIVAVKRCNHSGQGKNEFLSELSIIGSLRHRNLVHLQGWCHEKGEILLVYDLMPNGSLDKALHESRMPLSWPHRLKILLGVSSVLAYLHHECENQVIHRDIKTSNIMLDEGFIARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYVLTGRATEKTDVFSYGAVVLEVASGRRPIEKDAPAAGNGKVGISSNLVEWVWSLHQEGKLLTAADPRLEGEFEEGEMRKVLLVGLACSHPDSMARPTMRGVVQMLLGEAEVPIVPRAKPSTSYSTSQLLMNLQDSESECNNGMITISTSSSESSFNGRDSLMEV* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0383 685 Pfam Legume lectin domain 34 266 IPR001220 GO:0030246
Gso18g0383 685 CDD lectin_legume_LecRK_Arcelin_ConA 34 257 IPR001220 GO:0030246
Gso18g0383 685 ProSiteProfiles Protein kinase domain profile. 351 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0383 685 SUPERFAMILY Protein kinase-like (PK-like) 333 659 IPR011009 -
Gso18g0383 685 SMART serkin_6 351 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0383 685 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 28 271 - -
Gso18g0383 685 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 285 676 - -
Gso18g0383 685 Pfam Protein kinase domain 353 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0383 685 Gene3D - 32 280 - -
Gso18g0383 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 261 IPR013320 -
Gso18g0383 685 Gene3D Transferase(Phosphotransferase) domain 1 427 633 - -
Gso18g0383 685 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Gso18g0383 685 PANTHER - 285 676 - -
Gso18g0383 685 PANTHER - 28 271 - -
Gso18g0383 685 CDD STKc_IRAK 357 626 - -
Gso18g0383 685 Gene3D Phosphorylase Kinase; domain 1 313 426 - -
Gso18g0383 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0383 Gso-Chr18 3780850 3783520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0383 9 661 Receptor kinase-like Gene Family AT3G53380 64.017 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso18g0383 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0383 - - gmx:100815895 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0383 18 3780850 3783520 Gso18g0383 18 3780850 3783520 ECH
Gso18g0383 18 3780850 3783520 Gso14g1783 14 50125088 50127835 PCT
Gso18g0383 18 3780850 3783520 Gso2g2055 2 45165266 45168306 PCT
Gso14g1783 14 50125088 50127835 Gso18g0383 18 3780850 3783520 PCT
Gso2g2055 2 45165266 45168306 Gso18g0383 18 3780850 3783520 PCT