Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0379 ATGCCCTTGGAAGGGATTTTCATTGAACCTACTTCAACTTCTACACCTGATCTTTCCCTTCACATAAGTCCACCAAGCACTTCCTTTTCCTCTTCTTCGATTTGCAACAACAACAACACATCTGGTGGTGGTGGTGGCATCAATTATGAGGCACGCAATTCAACAAGCACAAATTTCCCTTCACAAGCTCACATTGAGCTTTCTTTGGGAAGGAATTTCAGTGTTGGAGGAGGAAGAGGAGGAGGAGGAGTTCCTGAAGAACCACTACCACACCACAACAACAACATCAACAATAACCCTTATTATCAAACCCAACAGGCTCATTTCCATCATCTTCAACACCATTCTAATGCTTCAAGAGCAACAACAACGACAAGCACTACTACAAGTTCCTCCAATCACATGAGTCACATAAATTATGGGGTTTCTTTGCTTGATGTGTCATCAGAAGGATTGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGTTCATTCCCTTTCTTGCCCTCGGAACATTCAAGAGACAACAAGGATCATCATGCCAAAATGTGTTTATATCATCACATGCCAACATATCCCTCTTTGTCCTCTTCTTGTTCTCCTCTGTGTTCTTCTTCGTCTTCTTCTTCTTCTCCAGCTGCACCCTACTTCGCCGCTGCTACCGCGGCGTATAGGGCTGCCACGGCCACAAGGTTTAATGGAATTTCCGGGGAGGCTTTCAAATCTCATCATCCATTGCACCACCATCACTCATCATCACCACACTATGGGGTTGGACTTGGACCCTCTCATGAGACCTCTGCAGGGTTGATGAGATCAAGGTTTTTGCCAAAGTTGCCAGCAAAGAGGAGCATGAGAGCACCGAGAATGCGGTGGACAAGCACACTCCACGCTCGATTTGTCCATGCTGTGGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAGTCAGTTCTTGAGCTCATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCTGCTTCTTCAGGCCTTTCAGATGGATCAGGAGAAGATGACATGTCTCCAATGGGAAGCAGTGGTGGAATGCGTCAATTTTCAGACCAAAGAAGCCTTTCTGATCGACCACTGCAACAAGATATGGACTACTCTTCAGGCAACAACACTCTATGGAGTAACTCTTCAAGTAGAGAAACATGGCAACAAAATAACTCTAATGACGTAGATGGTTTCAGACCCCCAATCTTCCAGTCACAACAAATATCAGGAGGGCATCAAATTCAGGAGTGTGATTCAACCCAACTCAAGAACAGTTTGTCAGGATCAAATTTAGAGTGCAAGAACCCAAGTTTGGAGTTCACATTAGGGAGACCAGATTGGAATGGCAAAGGACAAGCCTAA 1431 0.4528 MPLEGIFIEPTSTSTPDLSLHISPPSTSFSSSSICNNNNTSGGGGGINYEARNSTSTNFPSQAHIELSLGRNFSVGGGRGGGGVPEEPLPHHNNNINNNPYYQTQQAHFHHLQHHSNASRATTTTSTTTSSSNHMSHINYGVSLLDVSSEGLRPIKGIPVYHNRSFPFLPSEHSRDNKDHHAKMCLYHHMPTYPSLSSSCSPLCSSSSSSSSPAAPYFAAATAAYRAATATRFNGISGEAFKSHHPLHHHHSSSPHYGVGLGPSHETSAGLMRSRFLPKLPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDMSPMGSSGGMRQFSDQRSLSDRPLQQDMDYSSGNNTLWSNSSSRETWQQNNSNDVDGFRPPIFQSQQISGGHQIQECDSTQLKNSLSGSNLECKNPSLEFTLGRPDWNGKGQA* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0379 476 MobiDBLite consensus disorder prediction 113 133 - -
Gso18g0379 476 MobiDBLite consensus disorder prediction 344 421 - -
Gso18g0379 476 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 476 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gso18g0379 476 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 289 342 IPR006447 GO:0003677
Gso18g0379 476 MobiDBLite consensus disorder prediction 1 37 - -
Gso18g0379 476 MobiDBLite consensus disorder prediction 8 37 - -
Gso18g0379 476 Gene3D - 288 345 - -
Gso18g0379 476 SUPERFAMILY Homeodomain-like 286 342 IPR009057 -
Gso18g0379 476 MobiDBLite consensus disorder prediction 370 421 - -
Gso18g0379 476 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 476 - -
Gso18g0379 476 MobiDBLite consensus disorder prediction 244 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0379 Gso-Chr18 3695361 3701695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0379 153 473 G2-like Transcription Factor Family AT5G16560 48.105 2.14e-75 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso18g0379 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0379 - - gmx:100815360 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0379 18 3695361 3701695 Gso13g1236 13 27468250 27474942 GST