Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0361 ATGGCCAAAACAAAACTAACCTTATTAATAATCTCCTTCTTCACCACTTTTTCTGTTGTTTGTCTCTCCTCCCCCGCGGATTTTTTCCTCTATGGCGGGTGCACGCAGCAGCGTTACACCTCGAACTCGCCCTACGAGTCTAACCTGAACTCGCTCCTGACCTCGCTGGTGAACTCGGCCACCTACTCTTCCTACAACAACCTCACCGTGGTGGGGTCCAGCCAGAGCGACGCCGTCTACGGCCTCTACCAGTGCCGCGGCGACCTCGCCATGCCTGACTGCGCCGCCTGCGTCTCCCGTGCCGTCTCCCGCGCCGGGCAGCTCTGCCCAGCAACGTGCGGCGGCGCGGTCCAGCTGGACGGCTGCTTCATCAAGTACGACAATGTCACATTCCTGGGTGTGGAGGACAAGACCGTCGTGCTGAAGCGGTGTGGGCCCTCGGTGGGATTCGGGCCGGTCGGGTCGGGTGAGAGGGATGCGGTGATGGGCGGGTTGGCCGGTTCGGGCGGGTATTTCCGGGTCGGCGGGTCGGGTGATGTGAAGGGTGTGGCGCAGTGTTGTGGGGATTTGAGTTTCGCCGAGTGTCAGGATTGTGTGGGGGATGCGATCCGACGGCTGAGGAGTGAGTGTGCTGCTGCGGATTATGGGGATGTGTTCTTGGGGAAGTGTTACGCTAGATTCTCCACCAATGGTGCACATGCTTACAATTACAACAAGGCCCATGGAAAATCGGGCAATGAAGGTGAGAAGACATTTGCAATAATTGTTGGATTATTAGCAGGAGTAGCTATACTCATTATTTTCCTTGCTTTCCTGAGAAGGATTTGTGAGGGACACGGTAAATAA 846 0.5662 MAKTKLTLLIISFFTTFSVVCLSSPADFFLYGGCTQQRYTSNSPYESNLNSLLTSLVNSATYSSYNNLTVVGSSQSDAVYGLYQCRGDLAMPDCAACVSRAVSRAGQLCPATCGGAVQLDGCFIKYDNVTFLGVEDKTVVLKRCGPSVGFGPVGSGERDAVMGGLAGSGGYFRVGGSGDVKGVAQCCGDLSFAECQDCVGDAIRRLRSECAAADYGDVFLGKCYARFSTNGAHAYNYNKAHGKSGNEGEKTFAIIVGLLAGVAILIIFLAFLRRICEGHGK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0361 281 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
Gso18g0361 281 ProSiteProfiles Gnk2-homologous domain profile. 132 232 IPR002902 -
Gso18g0361 281 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Gso18g0361 281 Pfam Salt stress response/antifungal 175 229 IPR002902 -
Gso18g0361 281 Gene3D - 27 131 IPR038408 -
Gso18g0361 281 Gene3D - 160 231 IPR038408 -
Gso18g0361 281 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 277 - -
Gso18g0361 281 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 7 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0361 Gso-Chr18 3477213 3479997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0361 6 228 Pollen Coat Proteome AT4G20670 25.620 3.09e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0361 - - gmx:100811615 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0361 18 3477213 3479997 Gso14g1803 14 50378439 50380821 PCT
Gso18g0361 18 3477213 3479997 Gso2g2081 2 45405414 45407597 PCT
Gso14g1803 14 50378439 50380821 Gso18g0361 18 3477213 3479997 PCT
Gso2g2081 2 45405414 45407597 Gso18g0361 18 3477213 3479997 PCT