Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0353 ATGAAGAGGGATCACCGAGATAGCTGCGGCGGCGGCGGCGGCGGCGGGAGTGTGAAGGGTGAGTGTTCCTCAATGCCGTCGAACGGGAAGGCAAATATGTGGGAGGAACAACAACAACAACAACAACAGGGGATGGACGAGTTGCTGGCGGCGTTGGGGTACAAGGTTCGTGCTTCCGACATGGCCGACGTGGCACAGAAGCTGGAGCAGTTGGAGATGGTCATGGGTTGTGCCCAGGAAGAGGGAATTTCCCACCTCGCCTCCGACACCGTCCACTACGATCCCACGGATCTTTATTCCTGGGTCCAAACCATGTTAACCGAACTCAACCCTGAACCCAACAACAACAACAATAGCCTCCTCGGTCCATCTTCTCTCTTAATCGACAACAACACCGCCCCTGTTTTCAACGACGATTCCGAATATGACCTCAGAGCCATTCCTGGTATTGCAGCCTACCCTCCTCCTCCTCCACAAGACAACAACAACAACAACAACAACCTCGACGAAATCGAAACAGCTAACAACATCAACAAGCGTCTCAAGCCATCTCCAGTTGAATCAGCAGACTCCGCGTCTGAGCCCACGCGCACGGTGCTGCTCGTTGACCATCAGGAAGCCGGCGTGCGTCTGGTCCACACTCTCCTGGCGTGCGCGGAGGCCGTCCAGCAGGAGAATCTGAAGCTGGCCGACGCGCTCGTCAAGCACGTGGGCATACTCGCGGCTTCTCAAGCCGGCGCCATGAGGAAGGTGGCTTCCTACTTCGCCCAAGCCCTCGCGCGTCGTATCTACGGAATCTTCCCGGAAGAAACCCTCGACTCCTCCTTCTCCGACGTTCTCCACATGCACTTCTACGAGTCCTGCCCTTACCTCAAATTCGCGCACTTCACCGCGAATCAGGCTATCCTCGAAGCATTTGCCACTGCTGGGAGAGTCCACGTCATCGATTTCGGCCTCAGACAAGGGATGCAGTGGCCTGCACTCATGCAAGCCCTTGCATTGCGGCCCGGCGGGCCCCCGACTTTCCGTCTAACCGGAATCGGCCCGCCGCAGCCCGACAACACCGACGCGCTGCAGCAAGTGGGCTGGAAATTAGCCCAATTGGCCCAGAACATCGGCGTCCAGTTCGAATTCCGCGGCTTCGTTTGCAACAGCCTCGCGGATCTCGACCCGAAAATGCTCGAGATCCGACCCGGAGAAGCCGTCGCTGTCAACTCGGTTTTCGAGCTCCATCGTATGCTGGCCCGCCCGGGATCCGTCGACAAGGTCTTGGACACTGTTAAGAAAATCAAGCCGAAGATTGTCACCATCGTGGAACAAGAAGCGAACCACAACGGACCGGGTTTTCTTGACCGGTTCACTGAGGCCTTGCATTACTACTCCAGCCTATTCGACTCGCTGGAGGGTTCGTCCTCTTCGACCGGGTTGGGCTCACCAAATCAGGATCTGTTAATGTCCGAGTTGTACCTGGGGAGACAAATATGCAACGTGGTGGCTAACGAGGGCGCGGACCGGGTAGAGCGTCACGAGACTTTGAGTCAGTGGAGGGGGAGATTGGACTCGGCCGGGTTCGACCCGGTTCATCTCGGGTCCAACGCGTTCAAGCAAGCGAGTATGCTACTTGCTCTATTCGCAGGCGGTGACGGCTATAGGGTTGAGGAGAATAACGGCTGCCTCATGCTTGGCTGGCACACTCGGCCACTCATCGCTACCTCCGCCTGGAAGCTTCCCTCCCCGAACGACTTGCACTGTAAACTGTAG 1761 0.5724 MKRDHRDSCGGGGGGGSVKGECSSMPSNGKANMWEEQQQQQQQGMDELLAALGYKVRASDMADVAQKLEQLEMVMGCAQEEGISHLASDTVHYDPTDLYSWVQTMLTELNPEPNNNNNSLLGPSSLLIDNNTAPVFNDDSEYDLRAIPGIAAYPPPPPQDNNNNNNNLDEIETANNINKRLKPSPVESADSASEPTRTVLLVDHQEAGVRLVHTLLACAEAVQQENLKLADALVKHVGILAASQAGAMRKVASYFAQALARRIYGIFPEETLDSSFSDVLHMHFYESCPYLKFAHFTANQAILEAFATAGRVHVIDFGLRQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQNIGVQFEFRGFVCNSLADLDPKMLEIRPGEAVAVNSVFELHRMLARPGSVDKVLDTVKKIKPKIVTIVEQEANHNGPGFLDRFTEALHYYSSLFDSLEGSSSSTGLGSPNQDLLMSELYLGRQICNVVANEGADRVERHETLSQWRGRLDSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPSPNDLHCKL* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0353 586 Coils Coil 61 81 - -
Gso18g0353 586 PANTHER DELLA PROTEIN RGL1 40 575 IPR030006 GO:0003712|GO:0005634
Gso18g0353 586 Gene3D - 44 109 IPR038088 -
Gso18g0353 586 Pfam GRAS domain family 211 575 IPR005202 -
Gso18g0353 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 575 IPR005202 -
Gso18g0353 586 SMART DELLA_2 46 119 - -
Gso18g0353 586 Pfam Transcriptional regulator DELLA protein N terminal 46 113 IPR021914 -
Gso18g0353 586 ProSiteProfiles GRAS family profile. 202 575 IPR005202 -
Gso18g0353 586 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0353 Gso-Chr18 3358298 3360579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0353 47 576 GRAS Transcription Factor Family AT3G03450 65.363 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso18g0353 GRAS 1.8e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0353 K14494 - gmx:100799695 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0353 18 3358298 3360579 Gso13g1260 13 27864804 27867022 GST