Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0344 ATGGAGAGTCCCCATTCACTGTCTCCCTCTTCCTCCTCCGACGGCGTCGGCTTCGAGACGGAGGAGCCGCGGACGCCGCTGGCCGTGCGCCGCGCGCTGCAGCTCCTCAACTCCGGCGATCCCGACCTGCGCCTCCAAGCTGCTCGCGACATCCGGCGCCTCACGAAGACGTCACAACGTTGTCGGCGCCAGTTATCCCAGGCTGTCGGTCCACTCGTTTCCATGCTCCGAGTCGACTCGCCCGAGTCACACGAACCCGCTCTCCTCGCCTTGCTCAACCTCGCCGTCAAAGACGAAAAGAATAAAATCAATATTGTGGAGGCCGGTGCATTAGAACCGATAATTAGTTTCCTTAAGTCTCAGAATCTAAATCTGCAGGAGTCTGCAACTGCATCTTTGCTCACTCTATCTGCCTCTTCAACCAACAAACCAATCATTAGTGCTTGTGGTGTCATTCCTCTTCTTGTGCAGATCCTTAGAGATGGAAGCCATCAAGCTAAAGCTGATGCAGTAATGGCTCTCTCTAATTTATCAACACACACTAACAATCTCAGCATCATTCTCGAGACAAACCCAATCCCTTACATAGTTGATCTTCTCAAAACCTGTAAAAAATCCTCAAAAACGGCTGAAAAATGCTGTGCTTTGATAGAATCCTTGGTGGATTATGACGAGGGCAGAACTGCCTTGACATCTGAGGAAGGCGGGGTTCTTGCAGTTGTGGAAGTTCTCGAAAGCGGCACACTCCAAAGTAGGGAGCATGCTGTTGGAGCACTGTTGACAATGTGCCAAAGTGACCGATGTAAATACCGGGAACCAATTCTTAGAGAAGGTGTCATTCCAGGACTTCTTGAGCTTACTGTCCAAGGAACACCGAAGTCTCAGTCAAAAGCACGCACCCTCTTGCAGTTACTGAGAGAGTCTCCTTATCCGAGATCTGAAATTCAACCTGATACCCTTGAGAATATAGTATGCAACATCATATCTCAGATTGATGGCGATGATCAATCTGGTAAGGCAAAGAAGATGCTGGCTGAGATGGTCCAAGTCAGTATGGAACAGAGTCTGAGACATTTACAGCAAAGGGCTCTTGTATGCACCCCAAGTGATCTTCCTATAGCTGGCTGTGCTGCTTCTGAAGTTTCTTCAAAATGA 1155 0.4926 MESPHSLSPSSSSDGVGFETEEPRTPLAVRRALQLLNSGDPDLRLQAARDIRRLTKTSQRCRRQLSQAVGPLVSMLRVDSPESHEPALLALLNLAVKDEKNKINIVEAGALEPIISFLKSQNLNLQESATASLLTLSASSTNKPIISACGVIPLLVQILRDGSHQAKADAVMALSNLSTHTNNLSIILETNPIPYIVDLLKTCKKSSKTAEKCCALIESLVDYDEGRTALTSEEGGVLAVVEVLESGTLQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQSKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGCAASEVSSK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0344 384 Gene3D - 21 184 IPR011989 -
Gso18g0344 384 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 10 366 - -
Gso18g0344 384 SUPERFAMILY ARM repeat 29 333 IPR016024 -
Gso18g0344 384 PANTHER U BOX DOMAIN-CONTAINING 10 366 - -
Gso18g0344 384 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 109 151 IPR000225 GO:0005515
Gso18g0344 384 Pfam Armadillo/beta-catenin-like repeat 99 136 IPR000225 GO:0005515
Gso18g0344 384 SMART arm_5 224 264 IPR000225 GO:0005515
Gso18g0344 384 SMART arm_5 180 222 IPR000225 GO:0005515
Gso18g0344 384 SMART arm_5 57 96 IPR000225 GO:0005515
Gso18g0344 384 SMART arm_5 98 138 IPR000225 GO:0005515
Gso18g0344 384 SMART arm_5 139 179 IPR000225 GO:0005515
Gso18g0344 384 Gene3D - 186 358 IPR011989 -
Gso18g0344 384 MobiDBLite consensus disorder prediction 1 23 - -
Gso18g0344 384 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 150 192 IPR000225 GO:0005515
Gso18g0344 384 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0344 Gso-Chr18 3239599 3243738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0344 29 306 U-box Gene Family AT2G23140 33.929 6.49e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0344 - - gmx:100780954 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0344 18 3239599 3243738 Gso13g1273 13 28017931 28022205 GST
Gso18g0344 18 3239599 3243738 Gso14g0596 14 5821907 5826199 PCT
Gso18g0344 18 3239599 3243738 Gso2g2101 2 45628192 45632320 PCT
Gso14g0596 14 5821907 5826199 Gso18g0344 18 3239599 3243738 PCT
Gso2g2101 2 45628192 45632320 Gso18g0344 18 3239599 3243738 PCT