Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0335 ATGGCAATTGGGTTTATGGAGGTGCAGCTTGTGAAAGCAAAGGGGTTGTGTGACACTGATTTCTTTGGTAGTATGGACCCGTATGTTGTGATACAGTACAACGGTCAAGAGCGAAGGAGTAGTGTTGCTAAGGGACAGGGCAATAATCCGGTGTGGAATGAGAAATTTGAGTTTAAGGTAGAATATCCTACACCAAGTAACTCATACAAGGTCATCTTAAAAATCATGGACAAGGATTCGTTATCTGCAGATGACTTTGTTGGTCAAGCCATAGTCTATGTGGAAGACTTATTAGCCATAGGGGTAGGGGATGGTGCAGCTGAGCTGCAACCTCTCAAGTACAGAGTAATTCGTGAAGATCAATCTTATTGTGGAGAAATTGATGTTGGTATAACTTTTAAGGTTGAAGAAGAGTTCAATGGAGAAACTAAACGAGGAAGGAAGGACAGCAACTAG 456 0.4189 MAIGFMEVQLVKAKGLCDTDFFGSMDPYVVIQYNGQERRSSVAKGQGNNPVWNEKFEFKVEYPTPSNSYKVILKIMDKDSLSADDFVGQAIVYVEDLLAIGVGDGAAELQPLKYRVIREDQSYCGEIDVGITFKVEEEFNGETKRGRKDSN* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0335 151 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Gso18g0335 151 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 148 - -
Gso18g0335 151 SMART C2_3c 5 106 IPR000008 -
Gso18g0335 151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 133 IPR035892 -
Gso18g0335 151 Pfam C2 domain 6 101 IPR000008 -
Gso18g0335 151 PANTHER C2 DOMAIN-CONTAINING 1 148 - -
Gso18g0335 151 Gene3D C2 domain 2 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0335 Gso-Chr18 3175637 3177750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0335 3 109 C2H2 Transcription Factor Family AT4G21160 34.579 1.39e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0335 - - gmx:100805025 306.99