Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0320 ATGATGGCCAAAACCAAAACACCTGTGCTTGTGCTTCATCTCTGTGTTCTGACCCTTATGGCCACAAACCTTGGAAAATGTCAGCAAGAAGAGTTTTTCTTCAACGGGTTTGGTGGTGGTGGTGCCTCCAACATAACCTTAAACGGAGGAGCAGCGATTGAGCACAAGGGCCTACTTCGTTTAACAAACGACAATCAGAGAGTAATCGGGCACGCGTTTTATCCAACACCAATTCAGTTCAAGCACAAAAACGCCAAAGTTGTATCCTTTTCCACCGCTTTTGCGTTTGCAATCATCCCACAGTACCCAAAACTCGGTGGCCACGGTTTCGCCTTCACCATTTCACGCTCCACATCGCTTAAAGATGCGTACCCTAGCCAGTACTTGGGCCTCCTTAACCCAAACGATGTGGGGAATTTCTCAAACCACTTATTTGCAGTGGAATTCGACACCGTCCAAGACTTCGAATTCGGAGACATCAACGACAACCATGTCGGCATCAACCTCAACAACATGGCATCCAACAAATCCGTGGAAGCTGCGTTTTTTTCCCGAAATAATAAGCAAAACCTCAATTTGAAGAGTGGTGAAGTGACTCAAGCATGGGTTGATTACGATTCCTTAAAAAACAACTTAGAAGTTAGACTCTCCACAACTTCCTCCAAACCCACTTCACCAATTTTGTCATACAAAGTAGATCTCTCACCGATTCTCCAAGATTCCATGTACGTTGGGTTCTCCTCTTCAACAGGGTTACTCGCGAGCTCCCACTACATCCTCGGTTGGAGCTTCAAAACAAACGGAGACGCCAAAACTCTCTCCTTGAAAAACCTCCCTTCGCTCTCCGCCTCCTACAAAGCTCAAAAGCGCTTAATGTTAGCACTGATCATTCCAATTACACTCGCAGCAATTGCTCTAGCATGTTATTACAGAAAGATGAGAAAGACCGAATTGATCGAAGCTTGGGAGATGGAAGTTGTAGGGCCACACAGATTCCCATACAAGGAGCTACACAAAGCTACAAAAGGCTTCAAAGACCAGAACCTCATCGGGTTCGGAGGGTTCGGTCGTGTCTACAAAGGTGTCCTCCCGAAGTCCCACATCGAAGTCGCAGTGAAGCGAGTCTCGCACGAATCAAAACAAGGCATGCAGGAGTTCGTGTCGGAAATCTCAACCATAGGAAGGCTCCGACACAGAAACCTCGTACAGTTACTAGGTTGGTGTCGGAAACAAAACGAGCTATTGTTGGTCTACGATTTCATGCGAAACGGAAGCTTAGACAAATACCTATTCTTCGACCAACCGAGGAGAATACTTAGTTGGGAGCAAAGGTTTAAGATAATAAAAGGTGTGGCTTTAGGGTTAGTTTATTTGCACGAGGAGTGGGAGCAAACGGTGATTCACAGAGACGTGAAAGCGGGGAATGTTTTGTTGGACAACGAGATGAACGGAAGGTTGGGTGATTTTGGTTTGGCCAAGCTTTACGAGCACGGTGCGAACCCTGGCACCACACGTGTGGTGGGAACGCTGGGGTATCTTGCGCCGGAGCTCACACGGACGGGGAAACCAACGACGAGTTCTGATGTTTATGCGTTCGGGGCGTTGGTGTTGGAGGTGGTGTGTGGGAGGAGGCCGATTGAGGTGAAGGCGCAGCCGGAGGAGCTTGTGCTGGTGGAGTGGGTGTGGGAGCGGTGGCGCGTGGGGAACGTGTTGGCGGTGGTGGACCGTAGGTTGGGTGGGGTGTTTGATGAGGTGGAGGCTTTGTTGGTGGTGAAGGTGGGGTTGTTGTGTTCCGCGGAGGCGCCGGAAGAGAGGCCCAGTATGAGGCAGGTGGTGAGGTACATGGAGAGGGAGGTGGCGCCGCCGGAGGTGGGGGATGGGAAGAAAGAAGGTGGCGGGGGAGATGGGGAGTTTAAGGGTTATGTTCATTCGTATTCGACGGCGTCGTTTTTTGACGTGGAGAGTGCATCTGCGTCGTCTCTGTCACTTTCCGGTGGCCGTGAACGAAGACAAGATCGGTAA 2022 0.4995 MMAKTKTPVLVLHLCVLTLMATNLGKCQQEEFFFNGFGGGGASNITLNGGAAIEHKGLLRLTNDNQRVIGHAFYPTPIQFKHKNAKVVSFSTAFAFAIIPQYPKLGGHGFAFTISRSTSLKDAYPSQYLGLLNPNDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGINLNNMASNKSVEAAFFSRNNKQNLNLKSGEVTQAWVDYDSLKNNLEVRLSTTSSKPTSPILSYKVDLSPILQDSMYVGFSSSTGLLASSHYILGWSFKTNGDAKTLSLKNLPSLSASYKAQKRLMLALIIPITLAAIALACYYRKMRKTELIEAWEMEVVGPHRFPYKELHKATKGFKDQNLIGFGGFGRVYKGVLPKSHIEVAVKRVSHESKQGMQEFVSEISTIGRLRHRNLVQLLGWCRKQNELLLVYDFMRNGSLDKYLFFDQPRRILSWEQRFKIIKGVALGLVYLHEEWEQTVIHRDVKAGNVLLDNEMNGRLGDFGLAKLYEHGANPGTTRVVGTLGYLAPELTRTGKPTTSSDVYAFGALVLEVVCGRRPIEVKAQPEELVLVEWVWERWRVGNVLAVVDRRLGGVFDEVEALLVVKVGLLCSAEAPEERPSMRQVVRYMEREVAPPEVGDGKKEGGGGDGEFKGYVHSYSTASFFDVESASASSLSLSGGRERRQDR* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0320 673 SUPERFAMILY Protein kinase-like (PK-like) 328 617 IPR011009 -
Gso18g0320 673 ProSiteProfiles Protein kinase domain profile. 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0320 673 CDD lectin_legume_LecRK_Arcelin_ConA 43 268 IPR001220 GO:0030246
Gso18g0320 673 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 9 667 - -
Gso18g0320 673 Pfam Legume lectin domain 30 278 IPR001220 GO:0030246
Gso18g0320 673 Gene3D Transferase(Phosphotransferase) domain 1 421 627 - -
Gso18g0320 673 PANTHER - 9 667 - -
Gso18g0320 673 Gene3D - 28 283 - -
Gso18g0320 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 269 IPR013320 -
Gso18g0320 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Gso18g0320 673 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Gso18g0320 673 Pfam Protein kinase domain 345 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0320 673 SMART serkin_6 344 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0320 673 CDD STKc_IRAK 350 617 - -
Gso18g0320 673 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0320 Gso-Chr18 2944511 2950069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0320 30 665 Receptor kinase-like Gene Family AT3G55550 57.727 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso18g0320 Pkinase 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0320 - - gmx:100804136 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0320 18 2944511 2950069 Gso18g0320 18 2944511 2950069 ECH
Gso3g0564 3 14672563 14675307 Gso18g0320 18 2944511 2950069 ECH
Gso18g0320 18 2944511 2950069 Gso13g1298 13 28385672 28388098 GST