Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0266 ATGTCTTATTCTTCTTCAGCTTTTCCTTCTGTGGTCTCAAAATGCACCGTTGTCCCTCACCGGAACTCAACTATGGGAGACCTCAAGCTCTCTATCTCCGACCTTAACATGCTCTTATCTCACTACATCCAAAAGGGATGTCTCTTCACCACTCCTTCACTTCCCTCTTCCGCTCTCATCCCTCACCTCAAAAACGCTCTTTCCCAAACCCTCTCTCTCTTCCCTCCCCTCGCCGGCCGTCTCAAAACCGACGCCGACGGATACGTCTACATCACATGCAACGACACCGGCGTCGACTTCATCCACGTCACCGCCGCCGATATCTCCGTCGCAGACCTCCTCTCCCCGTCGTCGTCGTCGTCGTCGTCCGATGTCCCTCCAATCTTCAAACAACTCTTCCCCTTCCACCACAAAATCAGTTACACCGCTCATTCCTCCCCAATCATGGCCTTCCAGGTCACCGACCTCGCCGACGGCATCTTCCTCGGCTGCGCCGTCTGCCACGCCGTCACCGACGGCGCCTCCTTCTGGAACTTCTTCAACACCTTCGCCGGAATCTCAAGAGGAGCCACCACCTCTCCCTCCACCCTCCCGGATTTTCGCCGCGAATCCATCCTCAACTCCAACGTCGTGCTCCGCCTGCCAGAAGAAATCAAGGTGACCTTTAATGTAGAGGAGCCTTTTCGCGAGAGAATCTTCAGCTTCAGCCGCGAATCAATTCAGGAACTGAAAGCTACTGTGAACAATAATGGCTTGACATCGTTTCCGCCGCCAGAGAATGGTGACGCGGTTGAGTTGATGGCGAAGATGAGCAACGACACGCAACCGAAAACGGTGACGACGACAGAGATTTCGTCGTTTCAGTCACTGTGCGCGTTGGTGTGGCGCTGCGTGACCAAGGCGAGGAATATCGAGGGGTCTAAAACGACAACGTTCCGCATGGCAGTTAACGTTCGCCAACGCTTGGAACCCAAGTTGGGGGACTGTTACTTCGGGAACGCGATTCAGAGCATTGCCGCGTGTGCAGAAGCTGCTGACGTGGCGTCTAAGGAGCTTCGCTGGTGCGCGGAGCAGCTGAACAAAAGCGTGAAGGCGTTCGATAGTGCTACGGTGCACCGCAACGTGGAAAATTGGGAGCGCCAGCCAAAGTGCTTCGAGCTGGGGAACCACGACGGCGCCACCGTGCAGATGGGAAGCTCGCCGAGGTTTCCGATGTACGACAATGATTTCGGATGGGGGCGGCCCTTGGCCGTGCGCAGCGGCGGAGCGAACAAGTTTGACGGCAAGATGTCGGCGTTTCCCGGGAGGAATGGCGGCGGCGCCGTCGATTTGGAGGTGGTTTTGGCGCCGGACACCATGGCGAGACTTGAGTCTGATTCTGAGTTCATGTTTTACGTGTCTGGTTAG 1407 0.5615 MSYSSSAFPSVVSKCTVVPHRNSTMGDLKLSISDLNMLLSHYIQKGCLFTTPSLPSSALIPHLKNALSQTLSLFPPLAGRLKTDADGYVYITCNDTGVDFIHVTAADISVADLLSPSSSSSSSDVPPIFKQLFPFHHKISYTAHSSPIMAFQVTDLADGIFLGCAVCHAVTDGASFWNFFNTFAGISRGATTSPSTLPDFRRESILNSNVVLRLPEEIKVTFNVEEPFRERIFSFSRESIQELKATVNNNGLTSFPPPENGDAVELMAKMSNDTQPKTVTTTEISSFQSLCALVWRCVTKARNIEGSKTTTFRMAVNVRQRLEPKLGDCYFGNAIQSIAACAEAADVASKELRWCAEQLNKSVKAFDSATVHRNVENWERQPKCFELGNHDGATVQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKMSAFPGRNGGGAVDLEVVLAPDTMARLESDSEFMFYVSG* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0266 468 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 467 - -
Gso18g0266 468 SUPERFAMILY CoA-dependent acyltransferases 30 194 - -
Gso18g0266 468 Gene3D - 226 462 IPR023213 -
Gso18g0266 468 Gene3D - 9 218 IPR023213 -
Gso18g0266 468 Pfam Transferase family 12 463 - -
Gso18g0266 468 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0266 Gso-Chr18 2343587 2345390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0266 33 466 Monolignol Biosynthesis Gene Families AT5G48930 28.228 2.78e-42 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0266 - - gmx:100792476 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0266 18 2343587 2345390 Gso18g0266 18 2343587 2345390 ECH
Gso18g0266 18 2343587 2345390 Gso14g0525 14 5015636 5017324 PCT
Gso18g0266 18 2343587 2345390 Gso2g2167 2 46333809 46335674 PCT