Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0261 ATGTTTCATTGGGAGCCAACAAATTCTCAGAGAGGCAACCAATTGGAACTGCGGTTCAGAGCCAAGACGATGGTAACCGTCATGGTTATGCAGGTGTTGGCTGCCACCTTTATTCTTGTCTACACCGTTTTCTCAGCCACCGATGCCAAGTGTAACGCTAGAGACTCACACGTCCCTATTTTGGCACCCTTGCCAATTGGGTTCGCTGTGTTCTTGGTGCACTTGGCCACAATCCCAATCACTGGAACTGGTATTAACCCTGCACGTAGTCTCGGTGCTGCCATCATCTTCAACAAAGACCTTGGCTGGGATGATCACTGGATTTTCTGGGTTGGACCTTTCGTTGGTGCAGCTCTTGCGGCACTTTACCACCAAGTTGTAATCAGAGCCATTCCCTTCAAATAA 405 0.4889 MFHWEPTNSQRGNQLELRFRAKTMVTVMVMQVLAATFILVYTVFSATDAKCNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWDDHWIFWVGPFVGAALAALYHQVVIRAIPFK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0261 134 Pfam Major intrinsic protein 27 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso18g0261 134 Gene3D Glycerol uptake facilitator protein. 4 132 IPR023271 -
Gso18g0261 134 PANTHER AQUAPORIN PIP1-2-RELATED 34 134 - -
Gso18g0261 134 SUPERFAMILY Aquaporin-like 34 129 IPR023271 -
Gso18g0261 134 PRINTS Major intrinsic protein family signature 31 49 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso18g0261 134 PRINTS Major intrinsic protein family signature 67 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso18g0261 134 PRINTS Major intrinsic protein family signature 107 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso18g0261 134 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 34 134 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0261 Gso-Chr18 2290847 2291768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0261 33 134 Major Intrinsic Protein MIP AT4G23400 89.216 1.16e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0261 K09872 - gmx:100806988 275.789