Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0252 ATGGCTGCCACCACCGCCACCGCCACGTCATACTTTTTTGGCACCCGCCTCAACAACCCGACAACCTTAAACAACGGAAGATTCCACGCGCTCCTCAACTTCGGCAAAAAGAAGGCGGCGGCGCCGCCACCGAAGAAAAAGGAAGTGAAAGTGAAACCCTCCGGCGACCGGCTGGTGTGGTTTCCTAATGCGGAGCCGCCGGAGTGGCTCGACGGAAGCATGATCGGCGACCGCGGGTTCGACCCGTTCGGTTTCGCGAAGCCCGCGGAGTACCTGCAGTTCGACCTGGACTCGCTGGACCAGAACCTCGCGAAGAACGTCGCCGGCGATGTGATCGGAACCAGGGTGGAGGTCGCCGACGTTAAACCAACGCCGTTTCAGCCCTACTCGGAGGTTTTCGGGATTCAGAGGTTCCGCGAGTGCGAACTCATTCATGGAAGGTGGGCAATGCTGGGTGCTCTCGGTGCTTTGGTCGTTGAGGCTCTCACCGGAGTCGCGTGGCAAGACGCCGGAAAGGTAGAGCTGGTGGAAGGATCATCTTACCTGGGGCTTCCTCTTCCATTTTCATTGACCACACTGATCTGGATTGAGGTGATAGTGATAGGGTACATAGAATTTCAAAGAAATGCAGAACTTGACCCAGAGAAAAGGTTGTACCCAGGTGGCAGGTTCTTTGATCCTCTGGGTTTGGCCAACGACCCTGAAGAAAAGGCCAGACTTCAACTTGCTGAGATCAAGCATTCTCGCTTAGCCATGGTGGTCTTCCTCATCTTTGCAATTCAAGCTGCTGTAACAGGAAAAGGCCCTATCAGTTTTCTTGCTACCTTCAACAAGTGA 837 0.5484 MAATTATATSYFFGTRLNNPTTLNNGRFHALLNFGKKKAAAPPPKKKEVKVKPSGDRLVWFPNAEPPEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNVAGDVIGTRVEVADVKPTPFQPYSEVFGIQRFRECELIHGRWAMLGALGALVVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLATFNK* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0252 278 Gene3D Chlorophyll a/b binding protein domain 59 278 - -
Gso18g0252 278 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 278 - -
Gso18g0252 278 Pfam Chlorophyll A-B binding protein 66 262 IPR022796 -
Gso18g0252 278 SUPERFAMILY Chlorophyll a-b binding protein 54 275 - -
Gso18g0252 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 278 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0252 Gso-Chr18 2204501 2207352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0252 13 275 Chloroplast and Mitochondria Gene Families AT3G08940 71.863 1.56e-136 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0252 K08915 - gmx:100820335 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0252 18 2204501 2207352 Gso13g1365 13 29158565 29162419 GST