Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0251 ATGGCTTCTTTGCCAGCTTTGCCAACACTCCTCCTCTCGTTCGCCGCCATCTTCTTCACCGTCCTCCTCCTCCTCCTCCTCTTCCTCCGCCGCCGGCAGCTCCGCCTCCCGCCGGGGAGCTACGGCTTGCCGTTGATCGGCGAGACGCTGCAACTGATATCGGCGTACAAGAGCGACAATCCGGAGCCGTTCATCGACGAGCGCGTGGAGCGGTACGGGTCGATCTTCACGACGCACGTGTTCGGAGAGGCGACGGTGTTCTCGGCGGATCCGGAGGTGAACCGGTTCATTCTGCAGAACGAAGGGAAGCTGTTGGATTGCAGCTACCCCGGTTCGATATCGAACCTGCTGGGAAAACACTCTCTTCTGTTGATGAAAGGTGGTCTCCACAAGAGAATGCACTCTCTGACGATGAGCTTGGCCAATTCCTCCATCATCAAGGATCATCTTCTTCACCACATCGACCGCCTCGTCTGCCTCAACTTGGACGCCTGGTCCAACCGCGTCTTTCTTATGGACCAGGCAAAAAAGATAACATTTGAGCTAACGGTGAAGCAGTTGATGAGCTTTGACCCAGATGAATGGACTGAGAATCTAAGAAAAGAGTATGTTCTTGTGATTGAAGGATTCTTCACTCTCCCTTTTCCTCTCTTCTCCACCACATACCGCAGAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCACTAACGTTGGTAGTAAGGCAGAGGAGAAAAGAGTATGATGAAGACAAAGAGAAAAAGAATGACATGCTTGGGGCACTGTTGGCCTCCGGCGACCACTTTTCCGACGAGGAAATAGTGGATTTTTTGTTGGCTTTGCTCGTCGCCGGTTATGAGACCACCTCTACCATAATGACTCTTGCGATCAAGTTCCTCACTGAGACTCCCCTGGCCTTGGCACAGCTCAAGGAAGAGCATGACCAAATCAGAGCAAGAAGTGACCCAGGGACACCACTGGAATGGACCGATTACAAGTCAATGGCGTTTACTCAATGTGTTGTGAATGAGACCTTGAGAGTGGCAAACATAATTGGTGGGATTTTTAGGAGAGCAAGGACAGACATTGACATAAAAGGTTACACTATTCCTAAGGGATGGAAAGTCTTTGCATCATTTCGTGCTGTACATCTGAATCCTGAACATTACAAAGATGCCCGGTCCTTCAATCCCTGGAGATGGCAGAGTAACTCATCAGAAGCAACAAACCCTGGTAATGTTTATACACCATTTGGAGGAGGGCCACGGTTGTGCCCTGGCTATAAGCTAGCCAGAGTTGTACTTTCCGTCTTCCTTCACCGCATTGTTACCCGCTTCAGTTGGGTTCCTGCTGAGGAAGATAAGTTGGTGTTTTTCCCAACTACTAGGACGCAGAAGAGGTATCCAATTATTGTGCAGCGTAGAGACTAG 1428 0.5042 MASLPALPTLLLSFAAIFFTVLLLLLLFLRRRQLRLPPGSYGLPLIGETLQLISAYKSDNPEPFIDERVERYGSIFTTHVFGEATVFSADPEVNRFILQNEGKLLDCSYPGSISNLLGKHSLLLMKGGLHKRMHSLTMSLANSSIIKDHLLHHIDRLVCLNLDAWSNRVFLMDQAKKITFELTVKQLMSFDPDEWTENLRKEYVLVIEGFFTLPFPLFSTTYRRAIKARTKVAEALTLVVRQRRKEYDEDKEKKNDMLGALLASGDHFSDEEIVDFLLALLVAGYETTSTIMTLAIKFLTETPLALAQLKEEHDQIRARSDPGTPLEWTDYKSMAFTQCVVNETLRVANIIGGIFRRARTDIDIKGYTIPKGWKVFASFRAVHLNPEHYKDARSFNPWRWQSNSSEATNPGNVYTPFGGGPRLCPGYKLARVVLSVFLHRIVTRFSWVPAEEDKLVFFPTTRTQKRYPIIVQRRD* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0251 475 Gene3D Cytochrome P450 29 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 Pfam Cytochrome P450 37 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PANTHER CYTOCHROME P450 90A1 13 472 - -
Gso18g0251 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Gso18g0251 475 SUPERFAMILY Cytochrome P450 29 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PANTHER CYTOCHROME P450 26 13 472 - -
Gso18g0251 475 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0251 475 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0251 Gso-Chr18 2186501 2192156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0251 125 475 Cytochrome P450 AT5G05690 79.772 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0251 K09588 - gmx:100789842 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0251 18 2186501 2192156 Gso18g0251 18 2186501 2192156 ECH
Gso18g0251 18 2186501 2192156 Gso13g1366 13 29182846 29188546 GST
Gso18g0251 18 2186501 2192156 Gso14g0507 14 4859869 4866534 PCT
Gso18g0251 18 2186501 2192156 Gso2g2183 2 46508927 46515208 PCT
Gso14g0507 14 4859869 4866534 Gso18g0251 18 2186501 2192156 PCT
Gso2g2183 2 46508927 46515208 Gso18g0251 18 2186501 2192156 PCT