Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0246 ATGGCTAAGTACTATGATATTGATGATATTATCGTCGAGGAAGAGACTGTGTCAGTTATATTTCAGAAGGCTGCATCTGGAGTGGGAATAGATCCCAGTTCTTCAATTTTTATTGAAACAGGTTCCAAAGTTGAACTGCCTTTTTGGCTTGCTCATGAGTTACAGTTGAGACAAGCAGTATCAGTCAATGTTCCTCCTTGTTTCAATCAAAAGACAAGGCAGGAACTCCATGCTGATTCTGCAGGTGTGGATCTGAGGTCCAGATGTCCATTTTTCTATGAATTTGGTTGCAAGATAGCACCCATAGTTGGCGACCGAACCATTGGGTTTCTGTTGTTGTCTGCATTTAAGAGTAGGTACAAGGAAATTCTCACCAAGGCACATTCTGTAGCATTTGCAGCTGGTTCCAAATTTTGGACTATACTGACAAAAGAAGAGATATACTTGTATGAGACAGCTCAATCCGCAATGGCATCCTTCAAGAAGTGGCGAATGGGGGGGCCCAGATTTCAGATAGCTTCTGTACTGGGAAGAAAGAGAAAATCTAAGGAATAG 555 0.418 MAKYYDIDDIIVEEETVSVIFQKAASGVGIDPSSSIFIETGSKVELPFWLAHELQLRQAVSVNVPPCFNQKTRQELHADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLSAFKSRYKEILTKAHSVAFAAGSKFWTILTKEEIYLYETAQSAMASFKKWRMGGPRFQIASVLGRKRKSKE* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0246 184 CDD GINS_A_psf3 60 166 - -
Gso18g0246 184 SUPERFAMILY GINS helical bundle-like 64 165 IPR036224 -
Gso18g0246 184 Pfam GINS complex protein 44 147 IPR021151 -
Gso18g0246 184 Gene3D - 1 166 IPR038437 -
Gso18g0246 184 PANTHER UNCHARACTERIZED 1 183 IPR010492 -
Gso18g0246 184 SUPERFAMILY PriA/YqbF domain 2 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0246 Gso-Chr18 2129809 2134289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0246 1 182 Core DNA Replication Machinery Family AT3G55490 66.667 7.19e-91 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0246 K10734 - gmx:100799874 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0246 18 2129809 2134289 Gso18g0246 18 2129809 2134289 ECH
Gso18g0246 18 2129809 2134289 Gso13g1373 13 29258559 29264501 GST