Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0220 ATGAGCAAAAACTGGAAATCTAGCTGCTTCAGGGATCCTGGGGGAGTTCTCTTCCTTCTGGCGTTGTGTTTATTGTTTCAGAACTTTAGTTTGTGCTGCTCTTTGAATGAAGAAGGTAAAGCTCTTTTGAAGTTCAAGCATGGAATAGTAAACGACCCTTTTGATGCTTTGTCCAATTGGGTTAATGATGAAGTAGCAGTTAACCCCTGTAATTGGTTTGGAGTTGAGTGTTCTGATGGAAGAGTAGTGGTCTTGAATTTGAAAGACCTTTGTCTTGAAGGAAATCTGGTACCTGAGCTTGCAAACCTTGTTCACATAAAATCCATAATTTTGCGAAACAATTCTTTTTATGGAATCATCCCTGAAGGAATTGCACACTTGAATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACCGCTACCTAGAGATCTTGGGAATAATATTTCGTTAACAATCCTTTTGCTGGACAACAATGATCATCTTTGTGGTTTCTCTCCTGAAATTAATGAATTGAAGAAGCTTTCTGAATATCAAGTAGATGAAAACCAACTAATCCGTGCAGAAAAAGTGCCAGCTTGTAGAAGATCCATCAAACAGCAATCAAGGCATGTTGGCCAAAATAAAAATGGTGTTCAGAGGCTACTGCAAACTCGTACTCACGAAGGTGGAAGTCCTTTTAATCGTGTTTTTCCTGTTAGTCCTGCTCCATTTCCTTCAGCTCCCCCACCTGCCCCAGCAACGCCACCAGTGGTTCAGAAGCCTGCTCCTGTTGACCGAAATAATTCTGCTTCTCCTTCTCCCCTGCCTGGACCACGATCTGCACCGCTATATAAAAGTAGCTCATCAAAGAACCATGTAGTTGTTATTTTGGCTGGAGCTATGGGTGGTGCTGTATTTCTTCTCATTTCAATCATTGGCCTATATCTCTGTAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCCACAGGATTAAGCGGACAGCTTCAGAACGCATTTGTAACAGGTGTGCCAAAGCTAAAGAGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCATCCATTGGTACAGTGTACAAAGGGACTTTATCTAGTGGTGTTGAAATAGCTGTGGCATCTGTTGCAGCGACATCATCCAAAGATTGGTCAAAGACTTTAGAAGCCCAATTTAGGAACAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGATGAGCCTTTCACCAGAATGGTGGTTTTTGAGTATGCCCCGAATGGAACACTCTTTGAGCATTTACACATAAAAGAATCTGAGCACTTGGATTGGGGAACAAGACTTAGAATTGCCATGGGCATGGCTTACTGCCTACAACATATGCACCAGTTGGAGCCTCCTTTGGTCCTTAGCAACCTGAATTCTTCAGCTGTCCAACTCACTGATGATTATGCTGCCAAAATCTCTGATTTGAGTTTCTTAAATGAAATAGCTTCAGCTGTGATAAAATCTCCTGCTAGAAAAAACACTGACATGACACCAGCAAGTAACATTTACAGCTTTGGTGTTATATTATTTGAAATGGTAACTGGCAGACTCCCTTATTCAGTGGACAATGATGGCTCACTTGATGACTGGGCTTCACACTATTTACAAGGGGATCAGCCCCTCAAAGAAATGGTGGATCCGACTCTAGCATCCTTCCAAGAAGAACAACTAGAACAAGTCGATGCTTTGATTAAATCTTGTGTCCATCCTGATCAAAAGCAAAGACCAACAATGAAAGAAGTTTGTGTGAGATTAAGAGAGATAACAAAAATAACACCTGATGCAGCTGTTCCAAAGCTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCTGTAAATGCAAGCTGA 1935 0.4103 MSKNWKSSCFRDPGGVLFLLALCLLFQNFSLCCSLNEEGKALLKFKHGIVNDPFDALSNWVNDEVAVNPCNWFGVECSDGRVVVLNLKDLCLEGNLVPELANLVHIKSIILRNNSFYGIIPEGIAHLNELEVLDLGYNNFSGPLPRDLGNNISLTILLLDNNDHLCGFSPEINELKKLSEYQVDENQLIRAEKVPACRRSIKQQSRHVGQNKNGVQRLLQTRTHEGGSPFNRVFPVSPAPFPSAPPPAPATPPVVQKPAPVDRNNSASPSPLPGPRSAPLYKSSSSKNHVVVILAGAMGGAVFLLISIIGLYLCKTNKVATVKPWATGLSGQLQNAFVTGVPKLKRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASVAATSSKDWSKTLEAQFRNKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKESEHLDWGTRLRIAMGMAYCLQHMHQLEPPLVLSNLNSSAVQLTDDYAAKISDLSFLNEIASAVIKSPARKNTDMTPASNIYSFGVILFEMVTGRLPYSVDNDGSLDDWASHYLQGDQPLKEMVDPTLASFQEEQLEQVDALIKSCVHPDQKQRPTMKEVCVRLREITKITPDAAVPKLSPLWWAELEIASVNAS* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0220 644 Gene3D Transferase(Phosphotransferase) domain 1 437 625 - -
Gso18g0220 644 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Gso18g0220 644 ProSiteProfiles Protein kinase domain profile. 354 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0220 644 Pfam Protein tyrosine and serine/threonine kinase 356 612 IPR001245 GO:0004672|GO:0006468
Gso18g0220 644 Gene3D Ribonuclease Inhibitor 33 222 IPR032675 -
Gso18g0220 644 SUPERFAMILY Protein kinase-like (PK-like) 337 613 IPR011009 -
Gso18g0220 644 SUPERFAMILY L domain-like 35 190 - -
Gso18g0220 644 MobiDBLite consensus disorder prediction 225 282 - -
Gso18g0220 644 MobiDBLite consensus disorder prediction 235 256 - -
Gso18g0220 644 PANTHER PROTEIN MALE DISCOVERER 2 1 644 - -
Gso18g0220 644 Gene3D Phosphorylase Kinase; domain 1 327 436 - -
Gso18g0220 644 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Gso18g0220 644 PANTHER BNAA09G55080D PROTEIN 1 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0220 Gso-Chr18 1901132 1905425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0220 17 609 Receptor kinase-like Gene Family AT1G66830 26.407 7.94e-45 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gso18g0220 PK_Tyr_Ser-Thr 3.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0220 - - gmx:100784541 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0220 18 1901132 1905425 Gso18g0220 18 1901132 1905425 ECH
Gso18g0220 18 1901132 1905425 Gso13g1401 13 29526542 29530782 GST
Gso18g0220 18 1901132 1905425 Gso14g0486 14 4610019 4614347 PCT
Gso14g0486 14 4610019 4614347 Gso18g0220 18 1901132 1905425 PCT