Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0208 ATGGCGACTTCACGAGGCAATGGAATTGTCTCAAGTTATTGGGATTCCCATGGGCAGTGGCAAGTTTGTGTCGAAGACGATAGAAATGTGGGCTCTTTAGGAATTTTCATTGGGGATCGTCCATTTGAATTTGTGCTTCCTGCCTCTAAGAACACCCAAATTCATCTGCAACGTCCTGTCTCGCCGCTGGAAAACAGCCGAAAGCGCCATAAGCTGGATAGGTGCACTTCTCCGACAAGGCAGTGTGATAACGTGGTTTATAGTTCCAAATTGAAGGTAGTTGAGGCTGTTCCGAATTATTCTTCAAAGAGTCCAATGTTGGACTCCACAAGTCCAATAGTTGTCGAGGAGTGTCTGAGGTATGGGGGTGGCATTATTTTGGGCCCCACATTTTTGGGGCGGAGCAAGACGTATTGGCAGGTTTTATTTCCACCGAGACAGACGGAGTATTTAGTGATGGCATCCTTAACCGGCGCCGTATATTTCGTATTCTTAGTTGCATTGAAAATGGACGTACTAATGACCATAAGAGCAGCCAAAAGCACGTGGCGACTTGGAGTAATTCCCTTCCTCGCTTCATTTGTGGTTATCTTAGCACTCTTATGTCTCTATTATCACCCCCAACAAATTTCCTCTGCATCTTTAACAATCGCGCGTGTCTCAGTAAGCTGCTTAATGTCGTTGAGCAACTTCCCCGTCGTGTCTGATGCAATGCTTGAACTGAACCTCACAGCCACAGAACTTGGCCAGATCGCTCTCTCTTCCTCCATGATCAACGACATCATACTATGGCTTTTCATCGTTATGCATAGCTTCACATCTAATGTTGATGTGAAAAAATCAATCGCATTGTTGGGAAACTGGTGCTTGCTCGTCTTCTTCAACTTCTTTGTTCTTCGACCAACCATGAAATTGATTGCTATGAGAACCCCAGTTGGAAAACCTGTGAAGGAACTTTATGTTGTGTTGATACTTCTTGGGGTGCTAGTGATGGCTGGTGTGGGAGACTTGATGGGCGTAACGTTTCTCATGGGACCCTTGATTTTTGGTTTGGTCGTACCAAGTGGCCCCCCCTTAGGGACAACGCTAGCGGAGAAGAGTGAAGTTCTTACCACTGAGTTCTTGCTACCCTTCTTCTTTGTGTACATTGGCATCAACACGGATTTGTCTGCACTTGAGGATTGGCGCTTATTTTTGACCCTTCAGGGTGTTTTCTTCGCGGGAGACTTGGCCAAGTTGCTGGCCTGTGTGTTGGTTTCTCTAGCGTACAACATTAGACCTAAACATGGCACGCTACTTGGCCTCATGTTGAACATCAAGGGTATAACTCAACTCATAAGTTTGGCTAGATTCAAGAAACAAAAGATGTTGGATGAGGATACATTCAGTCAATTGGTGTTCTGTGTGGTACTTATAACCGCGATTGTAACACCCTTGGTTAACATATTGTACAAGCATCGCCCTCGAGTACACGCAGAAAGCTTATTCGAAGGGGAACTGAGAACGATCCAAAGCACTCCAAGAAACAGAGAGTTTCACATTGTTTGTTGTGTACATAATGAAGCAAACGTGCGTGGCATCACTGCCTTATTAGAAGAGTGCAACCCAGTGCAAGAGAGCCCCATATGCGTCTACGCAGTCCACCTTATCGAGCTCGTGGGGAAAAGTGCACCCATTCTCCTTCCCATAAAACATAGACACGGTAGCAGAAAATTCTTGTCTGTGAATTACCCCAACACCAACCACATCATGCAAGCCTTCGAAAACTACTCCAACAACTCAAGTGGGCCAGTCAAGGTTCTTCCCTACATCAACGTGGCACCTTACAAGAGCATGCACGACGCCATTTTCAACCTCGCCCAAGACAATATGGTGCCTTTCATTATCATCCCTTTTCACGAAAACGGCAACATTGACCTTGTCGGACACGTGGCAGCCTCCATCAGGAAGATGAATATTAGGTTTCAAGCGCATGCGCCATGCACGTTGGGGATACTCGTGGACCGGCACTCTCGGCTGGGCGCGTCCAACAACAACAACATGTATTTCAACGTGGGTGTATTCTTCATAGGTGGGGCCCACGATAGGGAAGCTCTGGCATTGGGAATTCGAATGTCGGAGCGTGCAGATACGAGGGTGAGCTTGTTTAGGTTTGTTATCGTGAACAAGAAACCGTGTGGTTGTAAAATTATTTTGACAAGAGAAGAGCGTGAAGAGGAAGAGGAAGATACCATGTTGGACGAGGGGTTAATTGACGAGTTCAAGAGCATGAAATATGGCATTGGTAACGTTTGTTGGTACGAGATTACGGTGGACGATGGGGTGGAGGTGTTGGAAGCAGTGCATAGTTTGGAAGGAAACTATGATCTTGTGATGGTGGGAAGGCGCCACAATGATGGATCTTTGAATGGAAAAGAAATGACAACTTTCATGGAGAACGCTGATGCATTGGGAATATTGGGGGATATGTTGTCTTCAGTAGAATTTTGTATGGGGATGGTTCCGGTTTTAGTGACACAGTGTGGTGGAGTGAAGATAAGTAGTAGTAGTAATAATAAGCTTGATAGAGTAGGTTCAGTTAATGTCTCACAAAAACGTTTATCTGTTCATAAATAA 2616 0.4549 MATSRGNGIVSSYWDSHGQWQVCVEDDRNVGSLGIFIGDRPFEFVLPASKNTQIHLQRPVSPLENSRKRHKLDRCTSPTRQCDNVVYSSKLKVVEAVPNYSSKSPMLDSTSPIVVEECLRYGGGIILGPTFLGRSKTYWQVLFPPRQTEYLVMASLTGAVYFVFLVALKMDVLMTIRAAKSTWRLGVIPFLASFVVILALLCLYYHPQQISSASLTIARVSVSCLMSLSNFPVVSDAMLELNLTATELGQIALSSSMINDIILWLFIVMHSFTSNVDVKKSIALLGNWCLLVFFNFFVLRPTMKLIAMRTPVGKPVKELYVVLILLGVLVMAGVGDLMGVTFLMGPLIFGLVVPSGPPLGTTLAEKSEVLTTEFLLPFFFVYIGINTDLSALEDWRLFLTLQGVFFAGDLAKLLACVLVSLAYNIRPKHGTLLGLMLNIKGITQLISLARFKKQKMLDEDTFSQLVFCVVLITAIVTPLVNILYKHRPRVHAESLFEGELRTIQSTPRNREFHIVCCVHNEANVRGITALLEECNPVQESPICVYAVHLIELVGKSAPILLPIKHRHGSRKFLSVNYPNTNHIMQAFENYSNNSSGPVKVLPYINVAPYKSMHDAIFNLAQDNMVPFIIIPFHENGNIDLVGHVAASIRKMNIRFQAHAPCTLGILVDRHSRLGASNNNNMYFNVGVFFIGGAHDREALALGIRMSERADTRVSLFRFVIVNKKPCGCKIILTREEREEEEEDTMLDEGLIDEFKSMKYGIGNVCWYEITVDDGVEVLEAVHSLEGNYDLVMVGRRHNDGSLNGKEMTTFMENADALGILGDMLSSVEFCMGMVPVLVTQCGGVKISSSSNNKLDRVGSVNVSQKRLSVHK* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0208 871 Gene3D - 112 493 IPR038770 -
Gso18g0208 871 PANTHER CATION/H + ANTIPORTER 122 860 - -
Gso18g0208 871 Pfam Sodium/hydrogen exchanger family 124 480 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso18g0208 871 PANTHER CATION/H+ EXCHANGER 3 122 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0208 Gso-Chr18 1783958 1788603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0208 112 840 Antiporter Super Family AT2G13620 33.019 4.61e-123 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0208 - - gsj:114395146 1696.4