Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0205 ATGTCATCACGTGCTCCTTCTCACTCTCCCTCTCTCTCACTACAAAAACCATTCTTCAACTTGCAACACACGCACACACACTGTTTTTTTGTTCCACTAAATCAAAACCTCTTATCTCTTACTCTCATTACATTCATTCTTTTGATTTTCGTTATGGTAGTAGCAGTGGAGAAAACCAACCTCACTTCACAATCACAATGCTTCAACCGTGTTTCTGACAAGAAGAAAGAAAGATGCAAGACACACATGAACAACGTTAACCCATGTTGTTTTTTGTTTCTCTTATGTGTGTGGAGCCTTGTTGTGCTCCCCTCATGCGTGAGGCCAGTTTTGTGTGAAGATGAAGGTTGGGATGGAGTGGTTGTGACAGCATCAAACCTCTTAGCACTTGAAGCTTTCAAGCAAGAGTTGGTTGATCCAGAAGGGTTCTTGCGGAGCTGGAATGACAGTGGCTATGGAGCTTGTTCCGGAGGTTGGGTTGGAATCAAGTGTGCTCAGGGACAGGTTATTGTGATCCAGCTTCCTTGGAAGGGTTTGAGGGGTCGAATCACCGACAAAATTGGCCAACTTCAAGGCCTCAGGAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCAACTTTGGGACTTCTTCCCAACCTTAGAGGGGTTCAGTTATTCAACAATAGGCTTACAGGTTCCATACCTCTTTCTTTAGGTTTCTGCCCTTTGCTTCAGTCTCTTGACCTCAGCAACAACTTGCTCACAGGAGCAATCCCTTATAGTCTTGCTAATTCCACTAAGCTTTATTGGCTTAACTTGAGTTTCAACTCCTTCTCTGGTCCTTTACCAGCTAGCCTAACTCACTCATTTTCTCTCACTTTTCTTTCTCTTCAAAATAACAATCTTTCTGGCTCCCTTCCTAACTCTTGGGGTGGAAATTCCAAGAATGGCTTCTTTAGGCTTCAAAATTTGATCCTAGATAATAACTTTTTCACTGGTGACGTTCCTGCTTCTTTGGGTAGCTTAAGAGAGCTCAATGAGATTTCCCTTAGTCATAATAAGTTTAGTGGAGCTATACCAAATGAAATAGGAACCCTTTCTAGGCTTAAGACACTTGACATTTCTAATAATGCCTTGAATGGGAACTTGCCTGCTACCCTCTCTAATTTATCCTCACTTACACTGCTGAATGCAGAGAACAACCTCCTTGACAATCAAATCCCTCAAAGTTTAGGTAGATTGCGTAATCTTTCTGTTCTGATTTTGAGTAGAAACCAATTTAGTGGACATATTCCTTCAAGCATTGCAAACATTTCCTCGCTTAGGCAGCTTGATTTGTCACTGAATAATTTCAGTGGAGAAATTCCAGTCTCCTTCGACAGTCAGCGCAGTCTAAATCTCTTCAATGTTTCCTACAATAGCCTTTCAGGTTCTGTTCCCCCTCTGCTTGCCAAGAAATTTAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGGTACAGCCCTTCAACCCCATGTCTTTCCCAAGCTCCATCACAAGGAGTCATTGCCCCACCTCCTGAAGTGTCAAAACATCACCATCATAGGAAGCTAAGCACCAAAGACATAATTCTCATAGTAGCAGGAGTTCTCCTCGTAGTTCTGATTATACTTTGTTGTGTCCTGCTTTTCTGCCTGATCAGAAAGAGATCAACATCTAAGGCCGGGAACGGCCAAGCCACCGAGGGTAGAGCGGCCACTATGAGGACAGAAAAAGGAGTCCCTCCAGTTGCTGCTGGTGATGTTGAAGCAGGTGGGGAGGCTGGAGGGAAACTAGTCCATTTTGATGGACCAATGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCTGAGATCATGGGAAAGAGCACCTATGGAACTGTTTATAAGGCTATTTTGGAGGATGGAAGTCAAGTTGCAGTAAAGAGATTGAGGGAAAAGATCACTAAAGGTCATAGAGAATTTGAATCAGAAGTCAGTGTTCTAGGAAAAATTAGACACCCCAATGTTTTGGCTCTGAGGGCCTATTACTTGGGACCCAAAGGGGAAAAGCTTCTGGTTTTTGATTACATGTCTAAAGGAAGTCTTGCTTCTTTCCTACATGGTGGTGGAACTGAAACATTCATTGATTGGCCAACAAGGATGAAAATAGCACAAGACTTGGCCCGTGGCTTGTTCTGCCTTCATTCCCAGGAGAACATCATACATGGGAACCTCACATCCAGCAATGTGTTGCTTGATGAGAATACAAATGCTAAAATTGCAGATTTTGGTCTTTCTCGGTTGATGTCAACTGCTGCTAATTCCAACGTGATAGCTACAGCTGGAGCATTGGGATACCGGGCACCTGAGCTCTCAAAGCTCAAGAAAGCAAACACTAAAACTGATATCTACAGTCTTGGTGTTATCTTGTTAGAACTCCTAACGAGGAAATCACCTGGGGTGCCTATGAATGGACTAGATTTGCCTCAGTGGGTTGCCTCAGTTGTCAAAGAGGAGTGGACAAATGAGGTTTTTGATGCAGACTTGATGAGAGATGCATCCACAGTTGGCGACGAGTTGCTAAACACGTTGAAGCTCGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCATCAAGTTCTCCAGCAGCTGGAAGAGATTAGACCAGAGAGATCAGTCACAGCCAGTCCCGGGGACGATATCGTATAG 2718 0.436 MSSRAPSHSPSLSLQKPFFNLQHTHTHCFFVPLNQNLLSLTLITFILLIFVMVVAVEKTNLTSQSQCFNRVSDKKKERCKTHMNNVNPCCFLFLLCVWSLVVLPSCVRPVLCEDEGWDGVVVTASNLLALEAFKQELVDPEGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLRGRITDKIGQLQGLRKLSLHDNQIGGSIPSTLGLLPNLRGVQLFNNRLTGSIPLSLGFCPLLQSLDLSNNLLTGAIPYSLANSTKLYWLNLSFNSFSGPLPASLTHSFSLTFLSLQNNNLSGSLPNSWGGNSKNGFFRLQNLILDNNFFTGDVPASLGSLRELNEISLSHNKFSGAIPNEIGTLSRLKTLDISNNALNGNLPATLSNLSSLTLLNAENNLLDNQIPQSLGRLRNLSVLILSRNQFSGHIPSSIANISSLRQLDLSLNNFSGEIPVSFDSQRSLNLFNVSYNSLSGSVPPLLAKKFNSSSFVGNIQLCGYSPSTPCLSQAPSQGVIAPPPEVSKHHHHRKLSTKDIILIVAGVLLVVLIILCCVLLFCLIRKRSTSKAGNGQATEGRAATMRTEKGVPPVAAGDVEAGGEAGGKLVHFDGPMAFTADDLLCATAEIMGKSTYGTVYKAILEDGSQVAVKRLREKITKGHREFESEVSVLGKIRHPNVLALRAYYLGPKGEKLLVFDYMSKGSLASFLHGGGTETFIDWPTRMKIAQDLARGLFCLHSQENIIHGNLTSSNVLLDENTNAKIADFGLSRLMSTAANSNVIATAGALGYRAPELSKLKKANTKTDIYSLGVILLELLTRKSPGVPMNGLDLPQWVASVVKEEWTNEVFDADLMRDASTVGDELLNTLKLALHCVDPSPSARPEVHQVLQQLEEIRPERSVTASPGDDIV* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0205 905 Gene3D Phosphorylase Kinase; domain 1 625 696 - -
Gso18g0205 905 Gene3D Transferase(Phosphotransferase) domain 1 697 901 - -
Gso18g0205 905 Gene3D Ribonuclease Inhibitor 381 495 IPR032675 -
Gso18g0205 905 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 73 898 - -
Gso18g0205 905 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 73 898 - -
Gso18g0205 905 SUPERFAMILY Protein kinase-like (PK-like) 623 892 IPR011009 -
Gso18g0205 905 PRINTS Leucine-rich repeat signature 241 254 - -
Gso18g0205 905 PRINTS Leucine-rich repeat signature 363 376 - -
Gso18g0205 905 ProSiteProfiles Protein kinase domain profile. 619 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0205 905 Pfam Protein tyrosine and serine/threonine kinase 622 887 IPR001245 GO:0004672|GO:0006468
Gso18g0205 905 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Gso18g0205 905 Pfam Leucine rich repeat N-terminal domain 127 164 IPR013210 -
Gso18g0205 905 CDD STKc_IRAK 625 890 - -
Gso18g0205 905 Gene3D Ribonuclease Inhibitor 285 380 IPR032675 -
Gso18g0205 905 Gene3D Ribonuclease Inhibitor 125 284 IPR032675 -
Gso18g0205 905 SUPERFAMILY L domain-like 163 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0205 Gso-Chr18 1761006 1764215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0205 117 892 Receptor kinase-like Gene Family AT3G51740 64.010 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso18g0205 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0205 - - gmx:547641 1581.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0205 18 1761006 1764215 Gso18g0205 18 1761006 1764215 ECH
Gso18g0205 18 1761006 1764215 Gso13g1413 13 29647787 29651237 GST
Gso18g0205 18 1761006 1764215 Gso14g0471 14 4457781 4461003 PCT
Gso14g0471 14 4457781 4461003 Gso18g0205 18 1761006 1764215 PCT