Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0195 ATGTCTCCGGCCGCCGGAGTCAGCGTCCCCCTCCTGGGGGATTCCAAAGGAACGCCGCCGCCGGCTTCCGTCCCCGGCGCGGTGTTCAACGTGGCCACCAGCATAGTCGGCGCCGGAATCATGTCGATTCCGGCGATCATGAAGGTTCTCGGCGTAGTTCCCGCTTTCGCGATGATTCTCGTGGTGGCCGTGCTGGCGGAACTGTCCGTGGACTTCCTGATGCGGTTCACGCACTCCGGCGAAACGACGACGTACGCTGGCGTCATGAGGGAGGCGTTCGGATCGGGTGGAGCATTAGCCGCGCAAGTTTGCGTCATCATCACCAACGTTGGGGGTTTAATTCTCTACCTTATCATCATCGGAGATGTGCTATCTGGAAAGCAAAATGGAGGGGAAGTGCATTTGGGCATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAATTCCCGGGAATTTGCTTTGCTTTTCACCTTGGTCTTTGTTATGCTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGCTCTGCAGTGTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGGTTGGCTATCACAGCTCTGGTGCAAGGAAAAACACAAACTCCTAGATTGTTTCCTCGGCTAGACTACCAAACCTCATTCTTTGATCTGTTCACTGCAGTTCCTGTTGTTGTCACAGCCTTCACATTTCACTTTAATGTGCACCCCATTGGGTTTGAGCTTGCCAAGGCATCCCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACCTTGCAATAGGCTTATTTGGGTACATGTTATTTGGGGATTCAACCCAGTCAGACATTCTCATCAATTTTGACCAGAATGCTGGTTCAGCAGTTGGTTCCTTGCTCAATAGTTTGGTCCGTGTAAGCTATGCCCTCCACATCATGCTGGTGTTTCCTCTCTTGAACTTCTCTTTGAGAACCAACATAGATGAAGTTCTCTTCCCTAAGAAGCCTATGCTAGCCACAGACAACAAAAGATTTATGATCCTCACTCTGGTGCTGCTTGTATTCTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTCCTGGGATCCTCATCCGCAGTGTGCCTTGCCTTCATTTTCCCCGGCTCTATTGTTTTAAGGGATGTTAAAGGTATATCAACGAGAAGAGACAAAATTATTGCACTGATAATGATTATACTAGCTGTGGTTACAAGTGTGCTTGCCATTTCCACCAACATATATAATGCTTTTAGTAGCAAGTCATAA 1311 0.4783 MSPAAGVSVPLLGDSKGTPPPASVPGAVFNVATSIVGAGIMSIPAIMKVLGVVPAFAMILVVAVLAELSVDFLMRFTHSGETTTYAGVMREAFGSGGALAAQVCVIITNVGGLILYLIIIGDVLSGKQNGGEVHLGILQQWFGIHWWNSREFALLFTLVFVMLPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAITALVQGKTQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASQMTTAVRLALLLCAVIYLAIGLFGYMLFGDSTQSDILINFDQNAGSAVGSLLNSLVRVSYALHIMLVFPLLNFSLRTNIDEVLFPKKPMLATDNKRFMILTLVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGSIVLRDVKGISTRRDKIIALIMIILAVVTSVLAISTNIYNAFSSKS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0195 436 PANTHER AMINO ACID TRANSPORTER 3 434 - -
Gso18g0195 436 Pfam Transmembrane amino acid transporter protein 22 426 IPR013057 -
Gso18g0195 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0195 Gso-Chr18 1685961 1688756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0195 22 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 62.347 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0195 - - gmx:100815694 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0195 18 1685961 1688756 Gso18g0195 18 1685961 1688756 ECH
Gso18g0195 18 1685961 1688756 Gso13g1424 13 29743005 29745491 GST
Gso18g0195 18 1685961 1688756 Gso14g0461 14 4396824 4402417 PCT
Gso14g0460 14 4389668 4392341 Gso18g0195 18 1685961 1688756 PCT