Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0192 ATGGATTGTTGTGTGTGTACAACTATGCCATTGATATTGAGGCCTCCGAGGAATACAATATGTGGGGCTTGTTATGAAGGAGTTAGGAGCATAATCAACATGATGAGCAATGTCGAAAGTGAGAAAGTAAAAGCAATGGCTAATCCAAATCCAAACAGTTCTCCAGTTTCGCGGCGAAATTCGAGTAAGACACTTGATGATTGTATAAGATGGTGCTCAGAGCAGATGGAGCAGTTTAATCAACAAAAAGAAGACTTGGTTTTTCTCAGAGGCTTTGTTTCAGCCTTCAAAGCACAGATTCACACGGATATATTGGTCAGTCCAGGCAGGCATGGTCCACCTATACCTGCACATAAGTCCGTTTTGGGAGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGTGATGAATGCAAGGCAGCACCAAGTAACAGCATAACTATACCCGATTTGAACCATGAAGAACTAGAGTCTCTCCTTGAGTTTCTGTACAGTGGGACCTTGGGTGTGGAAAAATTGGAGAAACATGTTTACGCTTTGTCACAAGCAGCTGATAAGTATGTGATCCCACATTTGCTGAAACACTGCGAACGATATCTGCTGAGTTCACTAAGCACTTCCAATGCCCTTGAGACATTGGAGATCGCGGATACTTGTTCCAACCACAACTTGAAGGAGACAACCTTGAATTTCTTAGTTAAAAACATTGAGCACATGGTGCCTTCACCTAAGTTTGAAACTTTTGTGCATAGGAGTCCACATCTTACTGTTCAACTAGTTACAAGGGCGTTTGTGAATGGTGCCAAATAA 810 0.4185 MDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNVESEKVKAMANPNPNSSPVSRRNSSKTLDDCIRWCSEQMEQFNQQKEDLVFLRGFVSAFKAQIHTDILVSPGRHGPPIPAHKSVLGARSEIFKNMLECDECKAAPSNSITIPDLNHEELESLLEFLYSGTLGVEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTSNALETLEIADTCSNHNLKETTLNFLVKNIEHMVPSPKFETFVHRSPHLTVQLVTRAFVNGAK* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0192 269 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 268 - -
Gso18g0192 269 SUPERFAMILY POZ domain 88 203 IPR011333 -
Gso18g0192 269 Gene3D Potassium Channel Kv1.1; Chain A 70 204 IPR011333 -
Gso18g0192 269 ProSiteProfiles BTB domain profile. 102 172 IPR000210 GO:0005515
Gso18g0192 269 SMART BTB_4 102 204 IPR000210 GO:0005515
Gso18g0192 269 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 268 IPR044784 -
Gso18g0192 269 Pfam BTB/POZ domain 99 203 IPR000210 GO:0005515
Gso18g0192 269 Gene3D - 205 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0192 Gso-Chr18 1666989 1668852 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gso18g0192 BTB 1e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0192 K10523 - gmx:100777561 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0192 18 1666989 1668852 Gso18g0192 18 1666989 1668852 ECH
Gso18g0192 18 1666989 1668852 Gso13g1427 13 29761714 29764014 GST