Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0151 ATGTGCGGAATCCTCGCAGTGTTGGGTTGCGTCGACAACTCTCAGACCAAGCGCGCTCGCATCATCGAATTGTCTCGCAGGTTGCGGCATAGAGGTCCTGATTGGAGTGGCATACATTGCTATGAGGATTGTTACCTTGCTCATCAACGCCTTGCTATTGTTGACCCTACTTCGGGGGATCAACCTTTGTACAACGAAGACAAAACTGTTATTGTCACTGTAAATGGGGAGATATACAATCACAAGCAATTGAGGCAGAAACTGAGTTCCCATCAATTTCGAACTGGTAGTGATTGTGAAGTGATTGCCCATCTTTATGAAGAACATGGAGAAGAATTTGTTAATATGCTGGATGGGATGTTTGCCTTTATTCTTCTTGATACTAGGGATAAAAGTTTTATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTATACTTGGGCTGGGGTCATGATGGATCAACATGGTTTGCATCTGAAATGAAAGCTCTGAGTGATGATTGTGAGAGATTCATATCTTTTCCTCCAGGGCATATCTATTCCAGCAAACAGGGAGGATTAAGAAGGTGGTACAATCCACCATGGTTTTCAGAGGATATTCCATCAACTCCCTATGATCCAACCCTTTTGCGTGAGACCTTCGAGAGGGCTGTAGTTAAGAGAATGATGACTGATGTACCTTTTGGAGTTCTTTTGTCTGGAGGATTGGACTCATCACTTGTTGCTGCAGTGGTCAATCGTTATTTGGCTGAATCTGAATCTGCTCGTCAATGGGGATCACAGTTACATACTTTCTGCATTGGTTTAAAGGGCTCTCCTGACTTGAAAGCTGCAAAAGAGGTAGCAGATTACCTTGGTACTCGTCACCATGAACTTTATTTCACGGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCATATTGAAACATATGATGTAACGACTATCAGAGCAAGTACTGCAATGTTTCTTATGTCCAGAAAAATTAAAGCCTTGGGAGTGAAAATGGTACTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTTCACAAGGCACCTAACAAGAAAGAGTTTCATGAAGAAACATGTCGAAAAATTAAAGCTCTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAACTGCAGCATGGGGTGTAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACGTAGCCATGAGTATAGATCCGGAATGGAAAATGATAAGGCCTGATCTTGGAAGGATAGAGAAGTGGGTATTACGCAATGCATTTGATGACGATAAGAATCCATATTTACCAAAGCACATATTGTACAGGCAGAAGGAACAATTCAGTGATGGGGTTGGTTACAGCTGGATTGATGGCTTGAAGGATCACGCAAACAAACAAGTCACAGATGCGACGATGATGGCTGCCAATTTTATTTACCCTGAAAACACTCCTACCACAAAAGAAGGATACCTCTACAGGACAATTTTTGAGAAGTTCTTTCCAAAGAATGCAGCAAAGGCAACAGTGCCAGGAGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAATGGGATGCAGCATGGTCAAAAAATCTTGATCCTTCTGGTCGTGCCGCACTTGGTATTCATGATGCTGCATATGATGCAGTGGATACCAAAATTGACGAGCCCAAAAATGGAACCCTTTAA 1710 0.4234 MCGILAVLGCVDNSQTKRARIIELSRRLRHRGPDWSGIHCYEDCYLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHKQLRQKLSSHQFRTGSDCEVIAHLYEEHGEEFVNMLDGMFAFILLDTRDKSFIAARDAIGITPLYLGWGHDGSTWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPWFSEDIPSTPYDPTLLRETFERAVVKRMMTDVPFGVLLSGGLDSSLVAAVVNRYLAESESARQWGSQLHTFCIGLKGSPDLKAAKEVADYLGTRHHELYFTVQEGIDALEEVIYHIETYDVTTIRASTAMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHLYDCLRANKSTAAWGVEARVPFLDKEFINVAMSIDPEWKMIRPDLGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANKQVTDATMMAANFIYPENTPTTKEGYLYRTIFEKFFPKNAAKATVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGIHDAAYDAVDTKIDEPKNGTL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0151 569 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Gso18g0151 569 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Gso18g0151 569 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Gso18g0151 569 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Gso18g0151 569 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 564 - -
Gso18g0151 569 PIRSF Asn_synthetase_glu-h 1 359 IPR006426 GO:0004066|GO:0006529
Gso18g0151 569 PIRSF Asn_synthetase_glu-h 356 516 IPR006426 GO:0004066|GO:0006529
Gso18g0151 569 Gene3D HUPs 195 514 IPR014729 -
Gso18g0151 569 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 202 485 - -
Gso18g0151 569 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Gso18g0151 569 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Gso18g0151 569 CDD AsnB 2 192 IPR033738 -
Gso18g0151 569 PANTHER ASPARAGINE SYNTHETASE 1 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0151 Gso-Chr18 1271501 1277793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0151 69 164 PRT Gene Family AT2G16570 33.962 1.19e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0151 K01953 - gmx:732660 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0151 18 1271501 1277793 Gso13g1473 13 30218613 30223931 GST